From 9477edb15efa0bd274f82a32e4d396e0abd6ae3f Mon Sep 17 00:00:00 2001 From: Rafael Artinano Date: Mon, 3 Mar 2025 14:02:39 +0000 Subject: [PATCH] Update README.md --- README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/README.md b/README.md index a29590d..15788ab 100644 --- a/README.md +++ b/README.md @@ -26,7 +26,7 @@ Code Approach 1 and 2 (2.1 - 2.2) contain the pattern searching algorithms as we First the file generate_the_excel.py filters the original dataset and provides a file without repetitions of the same proteins with different names. -In case of replicating the similarity matrixes compute_distance_mat.py provides the distance matrixes based on the input wanted. To replicate the experiment if used blosum62, the function generate_nwmodpremade for any other cases is generate_nwmod. +In case of replicating the similarity matrixes, compute_distance_mat.py provides the distance matrixes based on the input wanted. To replicate the experiment, if used blosum62, the function generate_nwmodpremade for any other cases is generate_nwmod. For the pattern search algorithm one have to introduce the data asked in param_file.conf and execute patterns.py -- 2.24.1