{ "cells": [ { "cell_type": "code", "execution_count": 1, "metadata": {}, "outputs": [ { "name": "stderr", "output_type": "stream", "text": [ "C:\\Users\\Usuario\\anaconda3\\lib\\site-packages\\pandas\\core\\computation\\expressions.py:20: UserWarning: Pandas requires version '2.7.3' or newer of 'numexpr' (version '2.7.1' currently installed).\n", " from pandas.core.computation.check import NUMEXPR_INSTALLED\n" ] } ], "source": [ "import networkx as nx\n", "import matplotlib.pyplot as plt\n", "import pandas as pd\n", "import seaborn as sns\n", "import numpy as np\n", "import matplotlib.pyplot as plt\n", "from pandas import DataFrame\n", "from cmapPy.pandasGEXpress.parse import parse\n", "from scipy.stats import hypergeom\n", "from tqdm import tqdm" ] }, { "cell_type": "code", "execution_count": 2, "metadata": {}, "outputs": [], "source": [ "df_adrs_sexbias = pd.read_csv(\"df_drug_adr_p_value_sex-bias_logodd_21_11_23.csv\", sep=\",\")" ] }, { "cell_type": "code", "execution_count": 3, "metadata": {}, "outputs": [ { "data": { "text/html": [ "
\n", " | Unnamed: 0 | \n", "Drug | \n", "ADR | \n", "Number adrs in Male | \n", "Number adrs in Female | \n", "P-value | \n", "p_value_FDR | \n", "Significance | \n", "Sex-biased | \n", "odds_ratio | \n", "Log2_Odds_ratio | \n", "sex_biased_log_oddratio | \n", "Sum_ADRS | \n", "
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | \n", "0 | \n", "DB00398 | \n", "10061428 | \n", "150 | \n", "52 | \n", "2.832808e-02 | \n", "(array([ True]), array([0.02832808]), 0.050000... | \n", "Yes | \n", "sex-biased male | \n", "0.699466 | \n", "-0.515673 | \n", "sex-biased male | \n", "202 | \n", "
1 | \n", "0 | \n", "DB00398 | \n", "10055798 | \n", "14 | \n", "15 | \n", "4.579148e-02 | \n", "(array([ True]), array([0.04579148]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "2.180080 | \n", "1.124381 | \n", "sex-biased female | \n", "29 | \n", "
2 | \n", "0 | \n", "DB00398 | \n", "10001760 | \n", "35 | \n", "47 | \n", "8.193338e-06 | \n", "(array([ True]), array([8.19333766e-06]), 0.05... | \n", "Yes | \n", "sex-biased female | \n", "2.748978 | \n", "1.458896 | \n", "sex-biased female | \n", "82 | \n", "
3 | \n", "0 | \n", "DB00398 | \n", "10018388 | \n", "4 | \n", "9 | \n", "1.362716e-02 | \n", "(array([ True]), array([0.01362716]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "4.576790 | \n", "2.194336 | \n", "sex-biased female | \n", "13 | \n", "
4 | \n", "0 | \n", "DB00398 | \n", "10043942 | \n", "2 | \n", "5 | \n", "4.333231e-02 | \n", "(array([ True]), array([0.04333231]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "5.081070 | \n", "2.345132 | \n", "sex-biased female | \n", "7 | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
3958 | \n", "0 | \n", "DB12332 | \n", "10010305 | \n", "2 | \n", "15 | \n", "2.164259e-02 | \n", "(array([ True]), array([0.02164259]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "0.101973 | \n", "-3.293734 | \n", "sex-biased male | \n", "17 | \n", "
3959 | \n", "0 | \n", "DB12332 | \n", "10061818 | \n", "2 | \n", "4 | \n", "2.632173e-03 | \n", "(array([ True]), array([0.00263217]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "0.027176 | \n", "-5.201535 | \n", "sex-biased male | \n", "6 | \n", "
3960 | \n", "0 | \n", "DB12332 | \n", "10066274 | \n", "2 | \n", "3 | \n", "1.770550e-03 | \n", "(array([ True]), array([0.00177055]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "0.020381 | \n", "-5.616655 | \n", "sex-biased male | \n", "5 | \n", "
3961 | \n", "0 | \n", "DB12332 | \n", "10043071 | \n", "2 | \n", "2 | \n", "1.071887e-03 | \n", "(array([ True]), array([0.00107189]), 0.050000... | \n", "Yes | \n", "no sex-biased | \n", "0.013586 | \n", "-6.201700 | \n", "sex-biased male | \n", "4 | \n", "
3962 | \n", "0 | \n", "DB12332 | \n", "10076476 | \n", "16 | \n", "55 | \n", "1.237521e-15 | \n", "(array([ True]), array([1.23752125e-15]), 0.05... | \n", "Yes | \n", "sex-biased female | \n", "0.044078 | \n", "-4.503794 | \n", "sex-biased male | \n", "71 | \n", "
3963 rows × 13 columns
\n", "\n", " | Drug | \n", "Drug_name | \n", "ADR | \n", "PT_name | \n", "SOC_name | \n", "Number adrs in Male | \n", "Number adrs in Female | \n", "P-value | \n", "p_value_FDR | \n", "Significance | \n", "Sex-biased | \n", "odds_ratio | \n", "Log2_Odds_ratio | \n", "sex_biased_log_oddratio | \n", "Sum_ADRS | \n", "
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | \n", "DB00398 | \n", "sorafenib | \n", "10061428 | \n", "decreased appetite | \n", "general disorders and administration site cond... | \n", "150 | \n", "52 | \n", "2.832808e-02 | \n", "(array([ True]), array([0.02832808]), 0.050000... | \n", "Yes | \n", "sex-biased male | \n", "0.699466 | \n", "-0.515673 | \n", "sex-biased male | \n", "202 | \n", "
1 | \n", "DB00398 | \n", "sorafenib | \n", "10055798 | \n", "haemorrhage | \n", "vascular disorders | \n", "14 | \n", "15 | \n", "4.579148e-02 | \n", "(array([ True]), array([0.04579148]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "2.180080 | \n", "1.124381 | \n", "sex-biased female | \n", "29 | \n", "
2 | \n", "DB00398 | \n", "sorafenib | \n", "10001760 | \n", "alopecia | \n", "skin and subcutaneous tissue disorders | \n", "35 | \n", "47 | \n", "8.193338e-06 | \n", "(array([ True]), array([8.19333766e-06]), 0.05... | \n", "Yes | \n", "sex-biased female | \n", "2.748978 | \n", "1.458896 | \n", "sex-biased female | \n", "82 | \n", "
3 | \n", "DB00398 | \n", "sorafenib | \n", "10018388 | \n", "glossodynia | \n", "gastrointestinal disorders | \n", "4 | \n", "9 | \n", "1.362716e-02 | \n", "(array([ True]), array([0.01362716]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "4.576790 | \n", "2.194336 | \n", "sex-biased female | \n", "13 | \n", "
4 | \n", "DB00398 | \n", "sorafenib | \n", "10043942 | \n", "tongue blistering | \n", "gastrointestinal disorders | \n", "2 | \n", "5 | \n", "4.333231e-02 | \n", "(array([ True]), array([0.04333231]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "5.081070 | \n", "2.345132 | \n", "sex-biased female | \n", "7 | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
3958 | \n", "DB12332 | \n", "rucaparib | \n", "10010305 | \n", "confusional state | \n", "nervous system disorders | \n", "2 | \n", "15 | \n", "2.164259e-02 | \n", "(array([ True]), array([0.02164259]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "0.101973 | \n", "-3.293734 | \n", "sex-biased male | \n", "17 | \n", "
3959 | \n", "DB12332 | \n", "rucaparib | \n", "10061818 | \n", "disease progression | \n", "general disorders and administration site cond... | \n", "2 | \n", "4 | \n", "2.632173e-03 | \n", "(array([ True]), array([0.00263217]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "0.027176 | \n", "-5.201535 | \n", "sex-biased male | \n", "6 | \n", "
3960 | \n", "DB12332 | \n", "rucaparib | \n", "10066274 | \n", "cytopenia | \n", "blood and lymphatic system disorders | \n", "2 | \n", "3 | \n", "1.770550e-03 | \n", "(array([ True]), array([0.00177055]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "0.020381 | \n", "-5.616655 | \n", "sex-biased male | \n", "5 | \n", "
3961 | \n", "DB12332 | \n", "rucaparib | \n", "10043071 | \n", "tachycardia | \n", "cardiac disorders | \n", "2 | \n", "2 | \n", "1.071887e-03 | \n", "(array([ True]), array([0.00107189]), 0.050000... | \n", "Yes | \n", "no sex-biased | \n", "0.013586 | \n", "-6.201700 | \n", "sex-biased male | \n", "4 | \n", "
3962 | \n", "DB12332 | \n", "rucaparib | \n", "10076476 | \n", "product use in unapproved indication | \n", "injury, poisoning and procedural complications | \n", "16 | \n", "55 | \n", "1.237521e-15 | \n", "(array([ True]), array([1.23752125e-15]), 0.05... | \n", "Yes | \n", "sex-biased female | \n", "0.044078 | \n", "-4.503794 | \n", "sex-biased male | \n", "71 | \n", "
3963 rows × 15 columns
\n", "\n", " | Drug_name | \n", "PT_name | \n", "
---|---|---|
0 | \n", "abiraterone | \n", "22 | \n", "
1 | \n", "afatinib | \n", "2 | \n", "
2 | \n", "anagrelide | \n", "2 | \n", "
3 | \n", "anastrozole | \n", "25 | \n", "
4 | \n", "axitinib | \n", "17 | \n", "
... | \n", "... | \n", "... | \n", "
69 | \n", "vemurafenib | \n", "2 | \n", "
70 | \n", "vinblastine | \n", "9 | \n", "
71 | \n", "vincristine | \n", "104 | \n", "
72 | \n", "vinorelbine | \n", "8 | \n", "
73 | \n", "vorinostat | \n", "3 | \n", "
74 rows × 2 columns
\n", "\n", " | PT_name | \n", "
---|---|
count | \n", "74.000000 | \n", "
mean | \n", "53.554054 | \n", "
std | \n", "93.011288 | \n", "
min | \n", "1.000000 | \n", "
25% | \n", "7.000000 | \n", "
50% | \n", "20.500000 | \n", "
75% | \n", "62.500000 | \n", "
max | \n", "599.000000 | \n", "
\n", " | Drug | \n", "Drug_name | \n", "ADR | \n", "PT_name | \n", "SOC_name | \n", "Number adrs in Male | \n", "Number adrs in Female | \n", "P-value | \n", "p_value_FDR | \n", "Significance | \n", "Sex-biased | \n", "odds_ratio | \n", "Log2_Odds_ratio | \n", "sex_biased_log_oddratio | \n", "Sum_ADRS | \n", "log_p_values | \n", "log_odd_ratios | \n", "
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
2850 | \n", "DB00877 | \n", "sirolimus | \n", "10012378 | \n", "depression | \n", "psychiatric disorders | \n", "4 | \n", "11 | \n", "0.035147 | \n", "(array([ True]), array([0.03514673]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "3.415398 | \n", "1.772054 | \n", "sex-biased female | \n", "15 | \n", "1.454115 | \n", "1.772054 | \n", "
2851 | \n", "DB00877 | \n", "sirolimus | \n", "10035528 | \n", "platelet count decreased | \n", "investigations | \n", "4 | \n", "14 | \n", "0.007180 | \n", "(array([ True]), array([0.0071797]), 0.0500000... | \n", "Yes | \n", "sex-biased female | \n", "4.350024 | \n", "2.121023 | \n", "sex-biased female | \n", "18 | \n", "2.143894 | \n", "2.121023 | \n", "
2852 | \n", "DB00877 | \n", "sirolimus | \n", "10028813 | \n", "nausea | \n", "gastrointestinal disorders | \n", "37 | \n", "50 | \n", "0.017054 | \n", "(array([ True]), array([0.01705352]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "1.683418 | \n", "0.751394 | \n", "sex-biased female | \n", "87 | \n", "1.768186 | \n", "0.751394 | \n", "
2853 | \n", "DB00877 | \n", "sirolimus | \n", "10040070 | \n", "septic shock | \n", "infections and infestations | \n", "14 | \n", "29 | \n", "0.003144 | \n", "(array([ True]), array([0.00314356]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "2.578851 | \n", "1.366728 | \n", "sex-biased female | \n", "43 | \n", "2.502579 | \n", "1.366728 | \n", "
2854 | \n", "DB00877 | \n", "sirolimus | \n", "10070863 | \n", "toxicity to various agents | \n", "injury, poisoning and procedural complications | \n", "13 | \n", "26 | \n", "0.006002 | \n", "(array([ True]), array([0.00600241]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "2.488598 | \n", "1.315333 | \n", "sex-biased female | \n", "39 | \n", "2.221675 | \n", "1.315333 | \n", "
2855 | \n", "DB00877 | \n", "sirolimus | \n", "10075160 | \n", "graft versus host disease in gastrointestinal ... | \n", "injury, poisoning and procedural complications | \n", "3 | \n", "10 | \n", "0.024279 | \n", "(array([ True]), array([0.02427924]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "4.139681 | \n", "2.049520 | \n", "sex-biased female | \n", "13 | \n", "1.614765 | \n", "2.049520 | \n", "
2856 | \n", "DB00877 | \n", "sirolimus | \n", "10008479 | \n", "chest pain | \n", "general disorders and administration site cond... | \n", "16 | \n", "2 | \n", "0.003608 | \n", "(array([ True]), array([0.00360844]), 0.050000... | \n", "Yes | \n", "sex-biased male | \n", "0.154547 | \n", "-2.693887 | \n", "sex-biased male | \n", "18 | \n", "2.442681 | \n", "-2.693887 | \n", "
2857 | \n", "DB00877 | \n", "sirolimus | \n", "10062237 | \n", "renal impairment | \n", "renal and urinary disorders | \n", "29 | \n", "10 | \n", "0.022597 | \n", "(array([ True]), array([0.02259651]), 0.050000... | \n", "Yes | \n", "sex-biased male | \n", "0.426076 | \n", "-1.230817 | \n", "sex-biased male | \n", "39 | \n", "1.645959 | \n", "-1.230817 | \n", "
2858 | \n", "DB00877 | \n", "sirolimus | \n", "10012174 | \n", "dehydration | \n", "metabolism and nutrition disorders | \n", "5 | \n", "16 | \n", "0.003977 | \n", "(array([ True]), array([0.00397712]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "3.978316 | \n", "1.992158 | \n", "sex-biased female | \n", "21 | \n", "2.400431 | \n", "1.992158 | \n", "
2859 | \n", "DB00877 | \n", "sirolimus | \n", "10018964 | \n", "haemoptysis | \n", "vascular disorders | \n", "8 | \n", "1 | \n", "0.048753 | \n", "(array([ True]), array([0.04875321]), 0.050000... | \n", "Yes | \n", "sex-biased male | \n", "0.154750 | \n", "-2.691985 | \n", "sex-biased male | \n", "9 | \n", "1.311997 | \n", "-2.691985 | \n", "
2860 | \n", "DB00877 | \n", "sirolimus | \n", "10057030 | \n", "pneumatosis intestinalis | \n", "gastrointestinal disorders | \n", "10 | \n", "1 | \n", "0.028602 | \n", "(array([ True]), array([0.02860178]), 0.050000... | \n", "Yes | \n", "sex-biased male | \n", "0.123752 | \n", "-3.014475 | \n", "sex-biased male | \n", "11 | \n", "1.543607 | \n", "-3.014475 | \n", "
2861 | \n", "DB00877 | \n", "sirolimus | \n", "10010305 | \n", "confusional state | \n", "nervous system disorders | \n", "18 | \n", "3 | \n", "0.006770 | \n", "(array([ True]), array([0.00676959]), 0.050000... | \n", "Yes | \n", "sex-biased male | \n", "0.206031 | \n", "-2.279064 | \n", "sex-biased male | \n", "21 | \n", "2.169438 | \n", "-2.279064 | \n", "
2862 | \n", "DB00877 | \n", "sirolimus | \n", "10011906 | \n", "death | \n", "general disorders and administration site cond... | \n", "58 | \n", "25 | \n", "0.007606 | \n", "(array([ True]), array([0.00760574]), 0.050000... | \n", "Yes | \n", "sex-biased male | \n", "0.531501 | \n", "-0.911855 | \n", "sex-biased male | \n", "83 | \n", "2.118858 | \n", "-0.911855 | \n", "
2863 | \n", "DB00877 | \n", "sirolimus | \n", "10021143 | \n", "hypoxia | \n", "respiratory, thoracic and mediastinal disorders | \n", "25 | \n", "7 | \n", "0.011528 | \n", "(array([ True]), array([0.01152798]), 0.050000... | \n", "Yes | \n", "sex-biased male | \n", "0.345994 | \n", "-1.531182 | \n", "sex-biased male | \n", "32 | \n", "1.938247 | \n", "-1.531182 | \n", "
2864 | \n", "DB00877 | \n", "sirolimus | \n", "10003445 | \n", "ascites | \n", "gastrointestinal disorders | \n", "3 | \n", "11 | \n", "0.013708 | \n", "(array([ True]), array([0.01370824]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "4.554750 | \n", "2.187372 | \n", "sex-biased female | \n", "14 | \n", "1.863018 | \n", "2.187372 | \n", "
2865 | \n", "DB00877 | \n", "sirolimus | \n", "10014625 | \n", "encephalopathy | \n", "nervous system disorders | \n", "6 | \n", "14 | \n", "0.025073 | \n", "(array([ True]), array([0.02507261]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "2.898887 | \n", "1.535499 | \n", "sex-biased female | \n", "20 | \n", "1.600801 | \n", "1.535499 | \n", "
2866 | \n", "DB00877 | \n", "sirolimus | \n", "10012601 | \n", "diabetes mellitus | \n", "metabolism and nutrition disorders | \n", "5 | \n", "20 | \n", "0.000410 | \n", "(array([ True]), array([0.00040994]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "4.977713 | \n", "2.315483 | \n", "sex-biased female | \n", "25 | \n", "3.387284 | \n", "2.315483 | \n", "
2867 | \n", "DB00877 | \n", "sirolimus | \n", "10023421 | \n", "kidney fibrosis | \n", "renal and urinary disorders | \n", "4 | \n", "13 | \n", "0.012320 | \n", "(array([ True]), array([0.01232045]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "4.038331 | \n", "2.013759 | \n", "sex-biased female | \n", "17 | \n", "1.909373 | \n", "2.013759 | \n", "
2868 | \n", "DB00877 | \n", "sirolimus | \n", "10058854 | \n", "cytomegalovirus viraemia | \n", "infections and infestations | \n", "15 | \n", "2 | \n", "0.006091 | \n", "(array([ True]), array([0.0060914]), 0.0500000... | \n", "Yes | \n", "sex-biased male | \n", "0.164882 | \n", "-2.600496 | \n", "sex-biased male | \n", "17 | \n", "2.215283 | \n", "-2.600496 | \n", "
2869 | \n", "DB00877 | \n", "sirolimus | \n", "10028034 | \n", "mouth ulceration | \n", "gastrointestinal disorders | \n", "4 | \n", "16 | \n", "0.002383 | \n", "(array([ True]), array([0.00238264]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "4.973863 | \n", "2.314367 | \n", "sex-biased female | \n", "20 | \n", "2.622941 | \n", "2.314367 | \n", "
2870 | \n", "DB00877 | \n", "sirolimus | \n", "10022004 | \n", "influenza like illness | \n", "general disorders and administration site cond... | \n", "9 | \n", "1 | \n", "0.028614 | \n", "(array([ True]), array([0.02861407]), 0.050000... | \n", "Yes | \n", "sex-biased male | \n", "0.137529 | \n", "-2.862191 | \n", "sex-biased male | \n", "10 | \n", "1.543420 | \n", "-2.862191 | \n", "
2871 | \n", "DB00877 | \n", "sirolimus | \n", "10028735 | \n", "nasal congestion | \n", "respiratory, thoracic and mediastinal disorders | \n", "8 | \n", "1 | \n", "0.048753 | \n", "(array([ True]), array([0.04875321]), 0.050000... | \n", "Yes | \n", "sex-biased male | \n", "0.154750 | \n", "-2.691985 | \n", "sex-biased male | \n", "9 | \n", "1.311997 | \n", "-2.691985 | \n", "
2872 | \n", "DB00877 | \n", "sirolimus | \n", "10046306 | \n", "upper respiratory tract infection | \n", "infections and infestations | \n", "4 | \n", "11 | \n", "0.035147 | \n", "(array([ True]), array([0.03514673]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "3.415398 | \n", "1.772054 | \n", "sex-biased female | \n", "15 | \n", "1.454115 | \n", "1.772054 | \n", "
2873 | \n", "DB00877 | \n", "sirolimus | \n", "10043645 | \n", "thrombotic microangiopathy | \n", "blood and lymphatic system disorders | \n", "5 | \n", "13 | \n", "0.029741 | \n", "(array([ True]), array([0.02974085]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "3.230036 | \n", "1.691550 | \n", "sex-biased female | \n", "18 | \n", "1.526647 | \n", "1.691550 | \n", "
2874 | \n", "DB00877 | \n", "sirolimus | \n", "10021015 | \n", "hypokalaemia | \n", "metabolism and nutrition disorders | \n", "2 | \n", "10 | \n", "0.008156 | \n", "(array([ True]), array([0.00815556]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "6.210730 | \n", "2.634763 | \n", "sex-biased female | \n", "12 | \n", "2.088546 | \n", "2.634763 | \n", "
2875 | \n", "DB00877 | \n", "sirolimus | \n", "10060931 | \n", "adenovirus infection | \n", "infections and infestations | \n", "16 | \n", "1 | \n", "0.000881 | \n", "(array([ True]), array([0.00088095]), 0.050000... | \n", "Yes | \n", "sex-biased male | \n", "0.077255 | \n", "-3.694235 | \n", "sex-biased male | \n", "17 | \n", "3.055047 | \n", "-3.694235 | \n", "
2876 | \n", "DB00877 | \n", "sirolimus | \n", "10014909 | \n", "enterovirus infection | \n", "infections and infestations | \n", "1 | \n", "8 | \n", "0.013409 | \n", "(array([ True]), array([0.01340937]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "9.934300 | \n", "3.312418 | \n", "sex-biased female | \n", "9 | \n", "1.872592 | \n", "3.312418 | \n", "
2877 | \n", "DB00877 | \n", "sirolimus | \n", "10019663 | \n", "hepatic failure | \n", "hepatobiliary disorders | \n", "2 | \n", "9 | \n", "0.015384 | \n", "(array([ True]), array([0.01538431]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "5.588306 | \n", "2.482411 | \n", "sex-biased female | \n", "11 | \n", "1.812922 | \n", "2.482411 | \n", "
2878 | \n", "DB00877 | \n", "sirolimus | \n", "10065042 | \n", "immune reconstitution inflammatory syndrome | \n", "general disorders and administration site cond... | \n", "8 | \n", "1 | \n", "0.048753 | \n", "(array([ True]), array([0.04875321]), 0.050000... | \n", "Yes | \n", "sex-biased male | \n", "0.154750 | \n", "-2.691985 | \n", "sex-biased male | \n", "9 | \n", "1.311997 | \n", "-2.691985 | \n", "
2879 | \n", "DB00877 | \n", "sirolimus | \n", "10076476 | \n", "product use in unapproved indication | \n", "injury, poisoning and procedural complications | \n", "231 | \n", "124 | \n", "0.000167 | \n", "(array([ True]), array([0.00016682]), 0.050000... | \n", "Yes | \n", "sex-biased male | \n", "0.655121 | \n", "-0.610166 | \n", "sex-biased male | \n", "355 | \n", "3.777754 | \n", "-0.610166 | \n", "
2880 | \n", "DB00877 | \n", "sirolimus | \n", "10037394 | \n", "pulmonary haemorrhage | \n", "respiratory, thoracic and mediastinal disorders | \n", "1 | \n", "7 | \n", "0.025996 | \n", "(array([ True]), array([0.02599577]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "8.690413 | \n", "3.119425 | \n", "sex-biased female | \n", "8 | \n", "1.585097 | \n", "3.119425 | \n", "
2881 | \n", "DB00877 | \n", "sirolimus | \n", "10074248 | \n", "herpes zoster meningoencephalitis | \n", "nervous system disorders | \n", "9 | \n", "1 | \n", "0.028614 | \n", "(array([ True]), array([0.02861407]), 0.050000... | \n", "Yes | \n", "sex-biased male | \n", "0.137529 | \n", "-2.862191 | \n", "sex-biased male | \n", "10 | \n", "1.543420 | \n", "-2.862191 | \n", "
\n", " | SOC_name | \n", "count | \n", "
---|---|---|
0 | \n", "infections and infestations | \n", "5 | \n", "
1 | \n", "gastrointestinal disorders | \n", "4 | \n", "
2 | \n", "general disorders and administration site cond... | \n", "4 | \n", "
3 | \n", "injury, poisoning and procedural complications | \n", "3 | \n", "
4 | \n", "metabolism and nutrition disorders | \n", "3 | \n", "
5 | \n", "nervous system disorders | \n", "3 | \n", "
6 | \n", "respiratory, thoracic and mediastinal disorders | \n", "3 | \n", "
7 | \n", "renal and urinary disorders | \n", "2 | \n", "
8 | \n", "psychiatric disorders | \n", "1 | \n", "
9 | \n", "investigations | \n", "1 | \n", "
10 | \n", "vascular disorders | \n", "1 | \n", "
11 | \n", "blood and lymphatic system disorders | \n", "1 | \n", "
12 | \n", "hepatobiliary disorders | \n", "1 | \n", "
\n", " | Drug | \n", "Drug_name | \n", "ADR | \n", "PT_name | \n", "SOC_name | \n", "Number adrs in Male | \n", "Number adrs in Female | \n", "P-value | \n", "p_value_FDR | \n", "Significance | \n", "Sex-biased | \n", "odds_ratio | \n", "Log2_Odds_ratio | \n", "sex_biased_log_oddratio | \n", "Sum_ADRS | \n", "log_p_values | \n", "log_odd_ratios | \n", "
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
3648 | \n", "DB00675 | \n", "tamoxifen | \n", "10053762 | \n", "off label use | \n", "injury, poisoning and procedural complications | \n", "7 | \n", "61 | \n", "0.047586 | \n", "(array([ True]), array([0.04758603]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "0.442636 | \n", "-1.175808 | \n", "sex-biased male | \n", "68 | \n", "1.322521 | \n", "-1.175808 | \n", "
3649 | \n", "DB00675 | \n", "tamoxifen | \n", "10062194 | \n", "metastasis | \n", "neoplasms benign, malignant and unspecified (i... | \n", "2 | \n", "5 | \n", "0.042700 | \n", "(array([ True]), array([0.0427005]), 0.0500000... | \n", "Yes | \n", "sex-biased female | \n", "0.128031 | \n", "-2.965434 | \n", "sex-biased male | \n", "7 | \n", "1.369567 | \n", "-2.965434 | \n", "
3650 | \n", "DB00675 | \n", "tamoxifen | \n", "10010774 | \n", "constipation | \n", "gastrointestinal disorders | \n", "6 | \n", "34 | \n", "0.012351 | \n", "(array([ True]), array([0.01235088]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "0.287424 | \n", "-1.798750 | \n", "sex-biased male | \n", "40 | \n", "1.908302 | \n", "-1.798750 | \n", "
3651 | \n", "DB00675 | \n", "tamoxifen | \n", "10035528 | \n", "platelet count decreased | \n", "investigations | \n", "4 | \n", "16 | \n", "0.014687 | \n", "(array([ True]), array([0.01468721]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "0.203733 | \n", "-2.295252 | \n", "sex-biased male | \n", "20 | \n", "1.833061 | \n", "-2.295252 | \n", "
3652 | \n", "DB00675 | \n", "tamoxifen | \n", "10058202 | \n", "cystoid macular oedema | \n", "eye disorders | \n", "3 | \n", "1 | \n", "0.000449 | \n", "(array([ True]), array([0.00044926]), 0.050000... | \n", "Yes | \n", "sex-biased male | \n", "0.016993 | \n", "-5.878919 | \n", "sex-biased male | \n", "4 | \n", "3.347499 | \n", "-5.878919 | \n", "
3653 | \n", "DB00675 | \n", "tamoxifen | \n", "10039203 | \n", "road traffic accident | \n", "injury, poisoning and procedural complications | \n", "2 | \n", "2 | \n", "0.013453 | \n", "(array([ True]), array([0.01345261]), 0.050000... | \n", "Yes | \n", "no sex-biased | \n", "0.051183 | \n", "-4.288202 | \n", "sex-biased male | \n", "4 | \n", "1.871193 | \n", "-4.288202 | \n", "
3654 | \n", "DB00675 | \n", "tamoxifen | \n", "10076309 | \n", "product use issue | \n", "injury, poisoning and procedural complications | \n", "5 | \n", "18 | \n", "0.004429 | \n", "(array([ True]), array([0.00442893]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "0.182730 | \n", "-2.452211 | \n", "sex-biased male | \n", "23 | \n", "2.353702 | \n", "-2.452211 | \n", "
3655 | \n", "DB00675 | \n", "tamoxifen | \n", "10010305 | \n", "confusional state | \n", "nervous system disorders | \n", "3 | \n", "6 | \n", "0.007850 | \n", "(array([ True]), array([0.00784975]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "0.102057 | \n", "-3.292558 | \n", "sex-biased male | \n", "9 | \n", "2.105144 | \n", "-3.292558 | \n", "
3656 | \n", "DB00675 | \n", "tamoxifen | \n", "10061218 | \n", "inflammation | \n", "general disorders and administration site cond... | \n", "2 | \n", "2 | \n", "0.013453 | \n", "(array([ True]), array([0.01345261]), 0.050000... | \n", "Yes | \n", "no sex-biased | \n", "0.051183 | \n", "-4.288202 | \n", "sex-biased male | \n", "4 | \n", "1.871193 | \n", "-4.288202 | \n", "
3657 | \n", "DB00675 | \n", "tamoxifen | \n", "10043607 | \n", "thrombosis | \n", "vascular disorders | \n", "4 | \n", "10 | \n", "0.003826 | \n", "(array([ True]), array([0.00382555]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "0.127184 | \n", "-2.975006 | \n", "sex-biased male | \n", "14 | \n", "2.417306 | \n", "-2.975006 | \n", "
3658 | \n", "DB00675 | \n", "tamoxifen | \n", "10066901 | \n", "treatment failure | \n", "general disorders and administration site cond... | \n", "2 | \n", "3 | \n", "0.021699 | \n", "(array([ True]), array([0.02169942]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "0.076789 | \n", "-3.702960 | \n", "sex-biased male | \n", "5 | \n", "1.663552 | \n", "-3.702960 | \n", "
3659 | \n", "DB00675 | \n", "tamoxifen | \n", "10008531 | \n", "chills | \n", "general disorders and administration site cond... | \n", "3 | \n", "6 | \n", "0.007850 | \n", "(array([ True]), array([0.00784975]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "0.102057 | \n", "-3.292558 | \n", "sex-biased male | \n", "9 | \n", "2.105144 | \n", "-3.292558 | \n", "
3660 | \n", "DB00675 | \n", "tamoxifen | \n", "10000125 | \n", "abnormal dreams | \n", "psychiatric disorders | \n", "3 | \n", "3 | \n", "0.002086 | \n", "(array([ True]), array([0.00208644]), 0.050000... | \n", "Yes | \n", "no sex-biased | \n", "0.050999 | \n", "-4.293397 | \n", "sex-biased male | \n", "6 | \n", "2.680594 | \n", "-4.293397 | \n", "
3661 | \n", "DB00675 | \n", "tamoxifen | \n", "10019063 | \n", "hallucination | \n", "psychiatric disorders | \n", "3 | \n", "5 | \n", "0.005428 | \n", "(array([ True]), array([0.00542822]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "0.085031 | \n", "-3.555872 | \n", "sex-biased male | \n", "8 | \n", "2.265342 | \n", "-3.555872 | \n", "
3662 | \n", "DB00675 | \n", "tamoxifen | \n", "10055798 | \n", "haemorrhage | \n", "vascular disorders | \n", "2 | \n", "5 | \n", "0.042700 | \n", "(array([ True]), array([0.0427005]), 0.0500000... | \n", "Yes | \n", "sex-biased female | \n", "0.128031 | \n", "-2.965434 | \n", "sex-biased male | \n", "7 | \n", "1.369567 | \n", "-2.965434 | \n", "
3663 | \n", "DB00675 | \n", "tamoxifen | \n", "10003553 | \n", "asthma | \n", "immune system disorders | \n", "2 | \n", "5 | \n", "0.042700 | \n", "(array([ True]), array([0.0427005]), 0.0500000... | \n", "Yes | \n", "sex-biased female | \n", "0.128031 | \n", "-2.965434 | \n", "sex-biased male | \n", "7 | \n", "1.369567 | \n", "-2.965434 | \n", "
3664 | \n", "DB00675 | \n", "tamoxifen | \n", "10051055 | \n", "deep vein thrombosis | \n", "vascular disorders | \n", "3 | \n", "7 | \n", "0.010812 | \n", "(array([ True]), array([0.01081199]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "0.119089 | \n", "-3.069885 | \n", "sex-biased male | \n", "10 | \n", "1.966095 | \n", "-3.069885 | \n", "
3665 | \n", "DB00675 | \n", "tamoxifen | \n", "10038435 | \n", "renal failure | \n", "renal and urinary disorders | \n", "2 | \n", "4 | \n", "0.031506 | \n", "(array([ True]), array([0.0315059]), 0.0500000... | \n", "Yes | \n", "sex-biased female | \n", "0.102405 | \n", "-3.287642 | \n", "sex-biased male | \n", "6 | \n", "1.501608 | \n", "-3.287642 | \n", "
3666 | \n", "DB00675 | \n", "tamoxifen | \n", "10074903 | \n", "intentional product misuse | \n", "injury, poisoning and procedural complications | \n", "2 | \n", "3 | \n", "0.021699 | \n", "(array([ True]), array([0.02169942]), 0.050000... | \n", "Yes | \n", "sex-biased female | \n", "0.076789 | \n", "-3.702960 | \n", "sex-biased male | \n", "5 | \n", "1.663552 | \n", "-3.702960 | \n", "
\n", " | SOC_name | \n", "count | \n", "
---|---|---|
0 | \n", "injury, poisoning and procedural complications | \n", "4 | \n", "
1 | \n", "general disorders and administration site cond... | \n", "3 | \n", "
2 | \n", "vascular disorders | \n", "3 | \n", "
3 | \n", "psychiatric disorders | \n", "2 | \n", "
4 | \n", "neoplasms benign, malignant and unspecified (i... | \n", "1 | \n", "
5 | \n", "gastrointestinal disorders | \n", "1 | \n", "
6 | \n", "investigations | \n", "1 | \n", "
7 | \n", "eye disorders | \n", "1 | \n", "
8 | \n", "nervous system disorders | \n", "1 | \n", "
9 | \n", "immune system disorders | \n", "1 | \n", "
10 | \n", "renal and urinary disorders | \n", "1 | \n", "