From 55cd369f45908c9402a5538f8a9850404a134111 Mon Sep 17 00:00:00 2001 From: Andrea Alvarez Perez Date: Thu, 3 Apr 2025 11:37:07 +0000 Subject: [PATCH] Update README.md --- data/disnet/README.md | 18 ------------------ 1 file changed, 18 deletions(-) diff --git a/data/disnet/README.md b/data/disnet/README.md index f372adb..e69de29 100644 --- a/data/disnet/README.md +++ b/data/disnet/README.md @@ -1,18 +0,0 @@ -# DISNET DATA - BIOLOGICAL ENTITIES AND ASSOCIATIONS - -This directory contains the data referring to the nodes and links used in this research. - -## Nodes - -| Data | Description | Identifier | Total | Source | ACCESSED DATE | -|-------------------------|------------------------------------------------------------------|--------------------------------------------------------------------------|--------|--------------------------------------------------------------------------------------------|----------------------| -| [Genes (gen.tsv)](https://medal.ctb.upm.es/internal/gitlab/disnet/network-medicine/network-medicine-and-single-cell-for-alzheimer/new/master/data/disnet/gen.tsv) | Data relating to genes, including their symbol and identifier | National Center of Biotechnology Information (NCBI) Identifiers | 26,181 | [NCBI](https://www.ncbi.nlm.nih.gov/) | May 2024 | - - -## Links - -| Data | Description | Identifier | Total | Source | ACCESSED DATE | -|-----------------------------------|------------------------------------------------------------------------------------|----------------------------------------------------------------|--------|-----------------------------------------------------------------------------------|----------------------------| -| [Disease – Gene (dis_gen.tsv)](https://medal.ctb.upm.es/internal/gitlab/disnet/network-medicine/network-medicine-and-single-cell-for-alzheimer/new/master/data/disnet/dis_gen.tsv) | Associations between diseases and genes whose mutation triggers the disease. Due to its size, the file is stored in | UMLS CUI – NCBI Identifier | 1,045,745 | [DisGeNET](https://www.disgenet.org/) | May 2024 | -| Gene – Protein (gen_pro.tsv) | Associations between genes and proteins produced from the gene | NCBI Identifier – Accession Number in UniProt | 15,770 | [DisGeNET](https://www.disgenet.org/) | May 2020 | -| Protein – Protein (pro_pro.tsv) | Associations between proteins that physically interact with each other | Accession number in UniProt – Accession number in UniProt | 439,863| [DisGeNET](https://www.disgenet.org/) | May 2020 | -- 2.24.1