The scripts in this folder are organized as follows: * download_files.py: Contains functions for downloading and decompressing the files needed for analysis. * download_files.ipynb: Jupyter notebook that applies the download functions to retrieve and decompress the files used for analysis. * preprocess_functions.py: Contains functions for preprocessing and filtering the data from the files. * insert_tables.py: Contains functions for inserting tables into the MySQL database. * preprocess_upload_data.ipynb: Jupyter notebook that preprocesses annotations and inserts all tables into the MySQL database. * gpl_main.ipynb: Jupyter notebook used to insert GPL data into the MySQL database.