{ "cells": [ { "cell_type": "markdown", "metadata": {}, "source": [ "**In this notebook data from HMDD database and LncRNADisease database related to miRNA-disease, lncRNA-disease and circRNA-disease associations is processed, inserted into SQL tables and analysed.**" ] }, { "cell_type": "code", "execution_count": 208, "metadata": {}, "outputs": [], "source": [ "import pandas as pd" ] }, { "cell_type": "markdown", "metadata": {}, "source": [ "***HMDD Database data processing***" ] }, { "cell_type": "code", "execution_count": 209, "metadata": { "scrolled": true }, "outputs": [ { "data": { "text/html": [ "
\n", " | category | \n", "mir | \n", "disease | \n", "mesh_name | \n", "pmid | \n", "causality | \n", "
---|---|---|---|---|---|---|
0 | \n", "circulation_biomarker_diagnosis_down | \n", "hsa-mir-15a | \n", "Leukemia, Lymphocytic, Chronic, B-Cell | \n", "Leukemia, Lymphocytic, Chronic, B-Cell | \n", "15737576 | \n", "no | \n", "
1 | \n", "circulation_biomarker_diagnosis_down | \n", "hsa-mir-16 | \n", "Leukemia, Lymphocytic, Chronic, B-Cell | \n", "Leukemia, Lymphocytic, Chronic, B-Cell | \n", "15737576 | \n", "no | \n", "
2 | \n", "circulation_biomarker_diagnosis_down | \n", "hsa-mir-143 | \n", "Colon Neoplasms | \n", "Colonic Neoplasms | \n", "16195701 | \n", "no | \n", "
3 | \n", "circulation_biomarker_diagnosis_down | \n", "hsa-mir-145 | \n", "Colon Neoplasms | \n", "Colonic Neoplasms | \n", "16195701 | \n", "no | \n", "
4 | \n", "circulation_biomarker_diagnosis_down | \n", "hsa-mir-223 | \n", "Leukemia, Lymphocytic, Chronic, B-Cell | \n", "Leukemia, Lymphocytic, Chronic, B-Cell | \n", "16251535 | \n", "no | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
35542 | \n", "tissue_expression_up | \n", "hsa-mir-3648 | \n", "Neoplasms [unspecific] | \n", "Neoplasms | \n", "30384176 | \n", "no | \n", "
35543 | \n", "tissue_expression_up | \n", "hsa-mir-3687 | \n", "Neoplasms [unspecific] | \n", "Neoplasms | \n", "30384176 | \n", "no | \n", "
35544 | \n", "tissue_expression_up | \n", "hsa-mir-4746 | \n", "Neoplasms [unspecific] | \n", "Neoplasms | \n", "30384176 | \n", "no | \n", "
35545 | \n", "tissue_expression_up | \n", "hsa-mir-760 | \n", "Neoplasms [unspecific] | \n", "Neoplasms | \n", "30384176 | \n", "no | \n", "
35546 | \n", "tissue_expression_up | \n", "hsa-mir-96 | \n", "Neoplasms [unspecific] | \n", "Neoplasms | \n", "30384176 | \n", "no | \n", "
35547 rows × 6 columns
\n", "\n", " | mir | \n", "causality | \n", "category | \n", "mesh_name | \n", "
---|---|---|---|---|
0 | \n", "hsa-mir-15a | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Leukemia, Lymphocytic, Chronic, B-Cell | \n", "
1 | \n", "hsa-mir-16 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Leukemia, Lymphocytic, Chronic, B-Cell | \n", "
2 | \n", "hsa-mir-143 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Colonic Neoplasms | \n", "
3 | \n", "hsa-mir-145 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Colonic Neoplasms | \n", "
4 | \n", "hsa-mir-223 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Leukemia, Lymphocytic, Chronic, B-Cell | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
35541 | \n", "hsa-mir-301b | \n", "no | \n", "tissue_expression_up | \n", "Neoplasms | \n", "
35542 | \n", "hsa-mir-3648 | \n", "no | \n", "tissue_expression_up | \n", "Neoplasms | \n", "
35543 | \n", "hsa-mir-3687 | \n", "no | \n", "tissue_expression_up | \n", "Neoplasms | \n", "
35544 | \n", "hsa-mir-4746 | \n", "no | \n", "tissue_expression_up | \n", "Neoplasms | \n", "
35545 | \n", "hsa-mir-760 | \n", "no | \n", "tissue_expression_up | \n", "Neoplasms | \n", "
27353 rows × 4 columns
\n", "\n", " | mir | \n", "causality | \n", "category | \n", "mesh_name | \n", "
---|---|---|---|---|
0 | \n", "hsa-mir-15a | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Leukemia, Lymphocytic, Chronic, B-Cell | \n", "
1 | \n", "hsa-mir-16 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Leukemia, Lymphocytic, Chronic, B-Cell | \n", "
2 | \n", "hsa-mir-143 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Colonic Neoplasms | \n", "
3 | \n", "hsa-mir-145 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Colonic Neoplasms | \n", "
4 | \n", "hsa-mir-223 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Leukemia, Lymphocytic, Chronic, B-Cell | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
35541 | \n", "hsa-mir-301b | \n", "no | \n", "tissue_expression_up | \n", "Neoplasms | \n", "
35542 | \n", "hsa-mir-3648 | \n", "no | \n", "tissue_expression_up | \n", "Neoplasms | \n", "
35543 | \n", "hsa-mir-3687 | \n", "no | \n", "tissue_expression_up | \n", "Neoplasms | \n", "
35544 | \n", "hsa-mir-4746 | \n", "no | \n", "tissue_expression_up | \n", "Neoplasms | \n", "
35545 | \n", "hsa-mir-760 | \n", "no | \n", "tissue_expression_up | \n", "Neoplasms | \n", "
25659 rows × 4 columns
\n", "\n", " | mir | \n", "causality | \n", "category | \n", "mesh_name | \n", "source_id | \n", "source_name | \n", "
---|---|---|---|---|---|---|
0 | \n", "hsa-mir-15a | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Leukemia, Lymphocytic, Chronic, B-Cell | \n", "5 | \n", "HMDD v3.2 | \n", "
1 | \n", "hsa-mir-16 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Leukemia, Lymphocytic, Chronic, B-Cell | \n", "5 | \n", "HMDD v3.2 | \n", "
2 | \n", "hsa-mir-143 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Colonic Neoplasms | \n", "5 | \n", "HMDD v3.2 | \n", "
3 | \n", "hsa-mir-145 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Colonic Neoplasms | \n", "5 | \n", "HMDD v3.2 | \n", "
4 | \n", "hsa-mir-223 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Leukemia, Lymphocytic, Chronic, B-Cell | \n", "5 | \n", "HMDD v3.2 | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
35541 | \n", "hsa-mir-301b | \n", "no | \n", "tissue_expression_up | \n", "Neoplasms | \n", "5 | \n", "HMDD v3.2 | \n", "
35542 | \n", "hsa-mir-3648 | \n", "no | \n", "tissue_expression_up | \n", "Neoplasms | \n", "5 | \n", "HMDD v3.2 | \n", "
35543 | \n", "hsa-mir-3687 | \n", "no | \n", "tissue_expression_up | \n", "Neoplasms | \n", "5 | \n", "HMDD v3.2 | \n", "
35544 | \n", "hsa-mir-4746 | \n", "no | \n", "tissue_expression_up | \n", "Neoplasms | \n", "5 | \n", "HMDD v3.2 | \n", "
35545 | \n", "hsa-mir-760 | \n", "no | \n", "tissue_expression_up | \n", "Neoplasms | \n", "5 | \n", "HMDD v3.2 | \n", "
25659 rows × 6 columns
\n", "\n", " | rna_id | \n", "causality | \n", "type | \n", "name | \n", "source_id | \n", "source_name | \n", "
---|---|---|---|---|---|---|
0 | \n", "hsa-mir-15a | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Leukemia, Lymphocytic, Chronic, B-Cell | \n", "5 | \n", "HMDD v3.2 | \n", "
1 | \n", "hsa-mir-16 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Leukemia, Lymphocytic, Chronic, B-Cell | \n", "5 | \n", "HMDD v3.2 | \n", "
2 | \n", "hsa-mir-143 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Colonic Neoplasms | \n", "5 | \n", "HMDD v3.2 | \n", "
3 | \n", "hsa-mir-145 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Colonic Neoplasms | \n", "5 | \n", "HMDD v3.2 | \n", "
4 | \n", "hsa-mir-223 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Leukemia, Lymphocytic, Chronic, B-Cell | \n", "5 | \n", "HMDD v3.2 | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
35541 | \n", "hsa-mir-301b | \n", "no | \n", "tissue_expression_up | \n", "Neoplasms | \n", "5 | \n", "HMDD v3.2 | \n", "
35542 | \n", "hsa-mir-3648 | \n", "no | \n", "tissue_expression_up | \n", "Neoplasms | \n", "5 | \n", "HMDD v3.2 | \n", "
35543 | \n", "hsa-mir-3687 | \n", "no | \n", "tissue_expression_up | \n", "Neoplasms | \n", "5 | \n", "HMDD v3.2 | \n", "
35544 | \n", "hsa-mir-4746 | \n", "no | \n", "tissue_expression_up | \n", "Neoplasms | \n", "5 | \n", "HMDD v3.2 | \n", "
35545 | \n", "hsa-mir-760 | \n", "no | \n", "tissue_expression_up | \n", "Neoplasms | \n", "5 | \n", "HMDD v3.2 | \n", "
25659 rows × 6 columns
\n", "\n", " | ncRNA Symbol | \n", "ncRNA Category | \n", "Species | \n", "Disease Name | \n", "Sample | \n", "Dysfunction Pattern | \n", "Validated Method/Prediction Method | \n", "Description | \n", "PubMed ID | \n", "
---|---|---|---|---|---|---|---|---|---|
0 | \n", "0610007N19Rik | \n", "lncRNA | \n", "Mus musculus | \n", "Diabetic Nephropathies | \n", "cell lines | \n", "Regulation [down-regulated] | \n", "qRT-PCR | \n", "Twelve lncRNAs displayed the same expressional... | \n", "28151474.0 | \n", "
1 | \n", "116HG | \n", "lncRNA | \n", "Homo sapiens | \n", "Prader-Willi syndrome | \n", "NaN | \n", "Expression [differentially expressed] | \n", "Meta-analysis | \n", "Long ncRNA 116HG has been shown to play a role... | \n", "24624135.0 | \n", "
2 | \n", "1500026H17Rik | \n", "lncRNA | \n", "Mus musculus | \n", "Diabetic Nephropathies | \n", "cell lines | \n", "Regulation [up-regulated] | \n", "qRT-PCR | \n", "Twelve lncRNAs displayed the same expressional... | \n", "28151474.0 | \n", "
3 | \n", "1700020I14Rik | \n", "lncRNA | \n", "Mus musculus | \n", "Diabetic Nephropathies | \n", "cell lines | \n", "Regulation [down-regulated] | \n", "qRT-PCR | \n", "Twelve lncRNAs displayed the same expressional... | \n", "28151474.0 | \n", "
4 | \n", "1700020I14Rik | \n", "lncRNA | \n", "Mus musculus | \n", "Diabetic Nephropathies | \n", "renal tissues of db/db DN mice compared with d... | \n", "Regulation [down-regulated] | \n", "RIP//Luciferase reporter gene assay//RNA seque... | \n", "Here, we have found dysexpressed long noncodin... | \n", "29700282.0 | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
206958 | \n", "ZSWIM8-AS1 | \n", "lncRNA | \n", "Homo sapiens | \n", "non-small cell lung carcinoma | \n", "NaN | \n", "NaN | \n", "TAM | \n", "NaN | \n", "NaN | \n", "
206959 | \n", "ZSWIM8-AS1 | \n", "lncRNA | \n", "Homo sapiens | \n", "stomach cancer | \n", "NaN | \n", "NaN | \n", "TAM | \n", "NaN | \n", "NaN | \n", "
206960 | \n", "ZSWIM8-AS1 | \n", "lncRNA | \n", "Homo sapiens | \n", "thyroid cancer | \n", "NaN | \n", "NaN | \n", "TAM | \n", "NaN | \n", "NaN | \n", "
206961 | \n", "ZSWIM8-AS1 | \n", "lncRNA | \n", "Homo sapiens | \n", "urinary bladder cancer | \n", "NaN | \n", "NaN | \n", "TAM | \n", "NaN | \n", "NaN | \n", "
206962 | \n", "ZXF2 | \n", "lncRNA | \n", "Homo sapiens | \n", "lung adenocarcinoma | \n", "lung tissue | \n", "Regulation [up-regulated] | \n", "qPCR | \n", "ZXF2 was overexpressed in lung adenocarcinoma ... | \n", "25896422.0 | \n", "
206963 rows × 9 columns
\n", "\n", " | ncRNA Symbol | \n", "ncRNA Category | \n", "Species | \n", "Disease Name | \n", "Sample | \n", "Dysfunction Pattern | \n", "Validated Method/Prediction Method | \n", "Description | \n", "PubMed ID | \n", "
---|---|---|---|---|---|---|---|---|---|
1 | \n", "116HG | \n", "lncRNA | \n", "Homo sapiens | \n", "Prader-Willi syndrome | \n", "NaN | \n", "Expression [differentially expressed] | \n", "Meta-analysis | \n", "Long ncRNA 116HG has been shown to play a role... | \n", "24624135.0 | \n", "
7 | \n", "17A | \n", "lncRNA | \n", "Homo sapiens | \n", "Alzheimer's disease | \n", "brain | \n", "Regulation [up-regulated] | \n", "IP//qRT-PCR//Western blot | \n", "17A is expressed in human brain,and we report ... | \n", "20888417.0 | \n", "
10 | \n", "1B FGF-antisense transcripts | \n", "lncRNA | \n", "Homo sapiens | \n", "endometriosis | \n", "NaN | \n", "Expression | \n", "qPCR//Microarray | \n", "Mihalich et al,reported patients with endometr... | \n", "23781896.0 | \n", "
14 | \n", "21A | \n", "lncRNA | \n", "Homo sapiens | \n", "astrocytoma | \n", "brain | \n", "Expression [differentially expressed] | \n", "qPCR | \n", "We identified 24 lncRNAs suitable as normalise... | \n", "25561975.0 | \n", "
15 | \n", "21A | \n", "lncRNA | \n", "Homo sapiens | \n", "cancer | \n", "cell line (293t) | \n", "Regulation [down-regulated] | \n", "Luciferase reporter gene assay//Northern blot/... | \n", "A detailed investigation of the function of on... | \n", "17274687.0 | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
206958 | \n", "ZSWIM8-AS1 | \n", "lncRNA | \n", "Homo sapiens | \n", "non-small cell lung carcinoma | \n", "NaN | \n", "NaN | \n", "TAM | \n", "NaN | \n", "NaN | \n", "
206959 | \n", "ZSWIM8-AS1 | \n", "lncRNA | \n", "Homo sapiens | \n", "stomach cancer | \n", "NaN | \n", "NaN | \n", "TAM | \n", "NaN | \n", "NaN | \n", "
206960 | \n", "ZSWIM8-AS1 | \n", "lncRNA | \n", "Homo sapiens | \n", "thyroid cancer | \n", "NaN | \n", "NaN | \n", "TAM | \n", "NaN | \n", "NaN | \n", "
206961 | \n", "ZSWIM8-AS1 | \n", "lncRNA | \n", "Homo sapiens | \n", "urinary bladder cancer | \n", "NaN | \n", "NaN | \n", "TAM | \n", "NaN | \n", "NaN | \n", "
206962 | \n", "ZXF2 | \n", "lncRNA | \n", "Homo sapiens | \n", "lung adenocarcinoma | \n", "lung tissue | \n", "Regulation [up-regulated] | \n", "qPCR | \n", "ZXF2 was overexpressed in lung adenocarcinoma ... | \n", "25896422.0 | \n", "
205982 rows × 9 columns
\n", "\n", " | ncRNA Symbol | \n", "ncRNA Category | \n", "Disease Name | \n", "Dysfunction Pattern | \n", "
---|---|---|---|---|
1 | \n", "116HG | \n", "lncRNA | \n", "Prader-Willi syndrome | \n", "Expression [differentially expressed] | \n", "
7 | \n", "17A | \n", "lncRNA | \n", "Alzheimer's disease | \n", "Regulation [up-regulated] | \n", "
10 | \n", "1B FGF-antisense transcripts | \n", "lncRNA | \n", "endometriosis | \n", "Expression | \n", "
14 | \n", "21A | \n", "lncRNA | \n", "astrocytoma | \n", "Expression [differentially expressed] | \n", "
15 | \n", "21A | \n", "lncRNA | \n", "cancer | \n", "Regulation [down-regulated] | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
206958 | \n", "ZSWIM8-AS1 | \n", "lncRNA | \n", "non-small cell lung carcinoma | \n", "NaN | \n", "
206959 | \n", "ZSWIM8-AS1 | \n", "lncRNA | \n", "stomach cancer | \n", "NaN | \n", "
206960 | \n", "ZSWIM8-AS1 | \n", "lncRNA | \n", "thyroid cancer | \n", "NaN | \n", "
206961 | \n", "ZSWIM8-AS1 | \n", "lncRNA | \n", "urinary bladder cancer | \n", "NaN | \n", "
206962 | \n", "ZXF2 | \n", "lncRNA | \n", "lung adenocarcinoma | \n", "Regulation [up-regulated] | \n", "
180887 rows × 4 columns
\n", "\n", " | ncRNA Symbol | \n", "ncRNA Category | \n", "Disease Name | \n", "Dysfunction Pattern | \n", "
---|---|---|---|---|
1 | \n", "116HG | \n", "lncRNA | \n", "Prader-Willi syndrome | \n", "Expression [differentially expressed] | \n", "
7 | \n", "17A | \n", "lncRNA | \n", "Alzheimer's disease | \n", "Regulation [up-regulated] | \n", "
10 | \n", "1B FGF-antisense transcripts | \n", "lncRNA | \n", "endometriosis | \n", "Expression | \n", "
14 | \n", "21A | \n", "lncRNA | \n", "astrocytoma | \n", "Expression [differentially expressed] | \n", "
15 | \n", "21A | \n", "lncRNA | \n", "cancer | \n", "Regulation [down-regulated] | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
206958 | \n", "ZSWIM8-AS1 | \n", "lncRNA | \n", "non-small cell lung carcinoma | \n", "ns | \n", "
206959 | \n", "ZSWIM8-AS1 | \n", "lncRNA | \n", "stomach cancer | \n", "ns | \n", "
206960 | \n", "ZSWIM8-AS1 | \n", "lncRNA | \n", "thyroid cancer | \n", "ns | \n", "
206961 | \n", "ZSWIM8-AS1 | \n", "lncRNA | \n", "urinary bladder cancer | \n", "ns | \n", "
206962 | \n", "ZXF2 | \n", "lncRNA | \n", "lung adenocarcinoma | \n", "Regulation [up-regulated] | \n", "
180887 rows × 4 columns
\n", "\n", " | ncRNA Symbol | \n", "ncRNA Category | \n", "Disease Name | \n", "Dysfunction Pattern | \n", "source_id | \n", "source_name | \n", "
---|---|---|---|---|---|---|
1 | \n", "116HG | \n", "lncRNA | \n", "Prader-Willi syndrome | \n", "Expression [differentially expressed] | \n", "6 | \n", "LncRNADisease | \n", "
7 | \n", "17A | \n", "lncRNA | \n", "Alzheimer's disease | \n", "Regulation [up-regulated] | \n", "6 | \n", "LncRNADisease | \n", "
10 | \n", "1B FGF-antisense transcripts | \n", "lncRNA | \n", "endometriosis | \n", "Expression | \n", "6 | \n", "LncRNADisease | \n", "
14 | \n", "21A | \n", "lncRNA | \n", "astrocytoma | \n", "Expression [differentially expressed] | \n", "6 | \n", "LncRNADisease | \n", "
15 | \n", "21A | \n", "lncRNA | \n", "cancer | \n", "Regulation [down-regulated] | \n", "6 | \n", "LncRNADisease | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
206958 | \n", "ZSWIM8-AS1 | \n", "lncRNA | \n", "non-small cell lung carcinoma | \n", "ns | \n", "6 | \n", "LncRNADisease | \n", "
206959 | \n", "ZSWIM8-AS1 | \n", "lncRNA | \n", "stomach cancer | \n", "ns | \n", "6 | \n", "LncRNADisease | \n", "
206960 | \n", "ZSWIM8-AS1 | \n", "lncRNA | \n", "thyroid cancer | \n", "ns | \n", "6 | \n", "LncRNADisease | \n", "
206961 | \n", "ZSWIM8-AS1 | \n", "lncRNA | \n", "urinary bladder cancer | \n", "ns | \n", "6 | \n", "LncRNADisease | \n", "
206962 | \n", "ZXF2 | \n", "lncRNA | \n", "lung adenocarcinoma | \n", "Regulation [up-regulated] | \n", "6 | \n", "LncRNADisease | \n", "
180887 rows × 6 columns
\n", "\n", " | rna_id | \n", "rna_category | \n", "name | \n", "type | \n", "source_id | \n", "source_name | \n", "
---|---|---|---|---|---|---|
1 | \n", "116HG | \n", "lncRNA | \n", "Prader-Willi syndrome | \n", "Expression [differentially expressed] | \n", "6 | \n", "LncRNADisease | \n", "
7 | \n", "17A | \n", "lncRNA | \n", "Alzheimer's disease | \n", "Regulation [up-regulated] | \n", "6 | \n", "LncRNADisease | \n", "
10 | \n", "1B FGF-antisense transcripts | \n", "lncRNA | \n", "endometriosis | \n", "Expression | \n", "6 | \n", "LncRNADisease | \n", "
14 | \n", "21A | \n", "lncRNA | \n", "astrocytoma | \n", "Expression [differentially expressed] | \n", "6 | \n", "LncRNADisease | \n", "
15 | \n", "21A | \n", "lncRNA | \n", "cancer | \n", "Regulation [down-regulated] | \n", "6 | \n", "LncRNADisease | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
206958 | \n", "ZSWIM8-AS1 | \n", "lncRNA | \n", "non-small cell lung carcinoma | \n", "ns | \n", "6 | \n", "LncRNADisease | \n", "
206959 | \n", "ZSWIM8-AS1 | \n", "lncRNA | \n", "stomach cancer | \n", "ns | \n", "6 | \n", "LncRNADisease | \n", "
206960 | \n", "ZSWIM8-AS1 | \n", "lncRNA | \n", "thyroid cancer | \n", "ns | \n", "6 | \n", "LncRNADisease | \n", "
206961 | \n", "ZSWIM8-AS1 | \n", "lncRNA | \n", "urinary bladder cancer | \n", "ns | \n", "6 | \n", "LncRNADisease | \n", "
206962 | \n", "ZXF2 | \n", "lncRNA | \n", "lung adenocarcinoma | \n", "Regulation [up-regulated] | \n", "6 | \n", "LncRNADisease | \n", "
180887 rows × 6 columns
\n", "\n", " | rna_id | \n", "causality | \n", "type | \n", "name | \n", "source_id | \n", "source_name | \n", "rna_category | \n", "
---|---|---|---|---|---|---|---|
0 | \n", "hsa-mir-15a | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Leukemia, Lymphocytic, Chronic, B-Cell | \n", "5 | \n", "HMDD v3.2 | \n", "NaN | \n", "
1 | \n", "hsa-mir-16 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Leukemia, Lymphocytic, Chronic, B-Cell | \n", "5 | \n", "HMDD v3.2 | \n", "NaN | \n", "
2 | \n", "hsa-mir-143 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Colonic Neoplasms | \n", "5 | \n", "HMDD v3.2 | \n", "NaN | \n", "
3 | \n", "hsa-mir-145 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Colonic Neoplasms | \n", "5 | \n", "HMDD v3.2 | \n", "NaN | \n", "
4 | \n", "hsa-mir-223 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Leukemia, Lymphocytic, Chronic, B-Cell | \n", "5 | \n", "HMDD v3.2 | \n", "NaN | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
206541 | \n", "ZSWIM8-AS1 | \n", "NaN | \n", "ns | \n", "non-small cell lung carcinoma | \n", "6 | \n", "LncRNADisease | \n", "lncRNA | \n", "
206542 | \n", "ZSWIM8-AS1 | \n", "NaN | \n", "ns | \n", "stomach cancer | \n", "6 | \n", "LncRNADisease | \n", "lncRNA | \n", "
206543 | \n", "ZSWIM8-AS1 | \n", "NaN | \n", "ns | \n", "thyroid cancer | \n", "6 | \n", "LncRNADisease | \n", "lncRNA | \n", "
206544 | \n", "ZSWIM8-AS1 | \n", "NaN | \n", "ns | \n", "urinary bladder cancer | \n", "6 | \n", "LncRNADisease | \n", "lncRNA | \n", "
206545 | \n", "ZXF2 | \n", "NaN | \n", "Regulation [up-regulated] | \n", "lung adenocarcinoma | \n", "6 | \n", "LncRNADisease | \n", "lncRNA | \n", "
206546 rows × 7 columns
\n", "\n", " | rna_id | \n", "rna_category | \n", "type | \n", "name | \n", "causality | \n", "
---|---|---|---|---|---|
0 | \n", "hsa-mir-15a | \n", "miRNA | \n", "circulation_biomarker_diagnosis_down | \n", "Leukemia, Lymphocytic, Chronic, B-Cell | \n", "no | \n", "
1 | \n", "hsa-mir-16 | \n", "miRNA | \n", "circulation_biomarker_diagnosis_down | \n", "Leukemia, Lymphocytic, Chronic, B-Cell | \n", "no | \n", "
2 | \n", "hsa-mir-143 | \n", "miRNA | \n", "circulation_biomarker_diagnosis_down | \n", "Colonic Neoplasms | \n", "no | \n", "
3 | \n", "hsa-mir-145 | \n", "miRNA | \n", "circulation_biomarker_diagnosis_down | \n", "Colonic Neoplasms | \n", "no | \n", "
4 | \n", "hsa-mir-223 | \n", "miRNA | \n", "circulation_biomarker_diagnosis_down | \n", "Leukemia, Lymphocytic, Chronic, B-Cell | \n", "no | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
206541 | \n", "ZSWIM8-AS1 | \n", "lncRNA | \n", "ns | \n", "non-small cell lung carcinoma | \n", "ns | \n", "
206542 | \n", "ZSWIM8-AS1 | \n", "lncRNA | \n", "ns | \n", "stomach cancer | \n", "ns | \n", "
206543 | \n", "ZSWIM8-AS1 | \n", "lncRNA | \n", "ns | \n", "thyroid cancer | \n", "ns | \n", "
206544 | \n", "ZSWIM8-AS1 | \n", "lncRNA | \n", "ns | \n", "urinary bladder cancer | \n", "ns | \n", "
206545 | \n", "ZXF2 | \n", "lncRNA | \n", "Regulation [up-regulated] | \n", "lung adenocarcinoma | \n", "ns | \n", "
206546 rows × 5 columns
\n", "\n", " | rna_id | \n", "causality | \n", "type | \n", "source_id | \n", "source_name | \n", "rna_category | \n", "
---|---|---|---|---|---|---|
name | \n", "\n", " | \n", " | \n", " | \n", " | \n", " | \n", " |
131I-resistant papillary thyroid carcinoma | \n", "1 | \n", "1 | \n", "1 | \n", "1 | \n", "1 | \n", "1 | \n", "
Abortion, Habitual | \n", "9 | \n", "2 | \n", "5 | \n", "2 | \n", "2 | \n", "2 | \n", "
Abortion, Spontaneous | \n", "21 | \n", "2 | \n", "4 | \n", "1 | \n", "1 | \n", "1 | \n", "
Acquired Immunodeficiency Syndrome | \n", "7 | \n", "1 | \n", "4 | \n", "1 | \n", "1 | \n", "1 | \n", "
Acute Coronary Syndrome | \n", "35 | \n", "2 | \n", "9 | \n", "2 | \n", "2 | \n", "2 | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
vascular disease | \n", "1 | \n", "1 | \n", "1 | \n", "1 | \n", "1 | \n", "1 | \n", "
vascular endothelial dysfunction | \n", "1 | \n", "1 | \n", "1 | \n", "1 | \n", "1 | \n", "1 | \n", "
velocardiofacial syndrome | \n", "116 | \n", "1 | \n", "1 | \n", "1 | \n", "1 | \n", "1 | \n", "
ventricular septal defect | \n", "3 | \n", "1 | \n", "2 | \n", "1 | \n", "1 | \n", "1 | \n", "
vulva squamous cell carcinoma | \n", "2 | \n", "1 | \n", "1 | \n", "1 | \n", "1 | \n", "1 | \n", "
1092 rows × 6 columns
\n", "\n", " | name | \n", "
---|---|
0 | \n", "angiosarcoma | \n", "
1 | \n", "pterygium | \n", "
2 | \n", "disease of metabolism | \n", "
3 | \n", "Streptococcus pneumonia | \n", "
4 | \n", "bacterial sepsis | \n", "
... | \n", "... | \n", "
14392 | \n", "Cardiotoxicity | \n", "
14393 | \n", "Pectus Carinatum | \n", "
14394 | \n", "Speech Sound Disorder | \n", "
14395 | \n", "Pulmonary Arterial Remodeling | \n", "
14396 | \n", "atresia | \n", "
14397 rows × 1 columns
\n", "\n", " | disease_id | \n", "name | \n", "vocab | \n", "
---|---|---|---|
0 | \n", "C0018923 | \n", "angiosarcoma | \n", "DO | \n", "
1 | \n", "C0854893 | \n", "angiosarcoma | \n", "DO | \n", "
2 | \n", "C0033999 | \n", "pterygium | \n", "DO | \n", "
3 | \n", "C0025517 | \n", "disease of metabolism | \n", "DO | \n", "
4 | \n", "C0155862 | \n", "Streptococcus pneumonia | \n", "DO | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "
22229 | \n", "C3850148 | \n", "Pulmonary Arterial Remodeling | \n", "MSH | \n", "
22230 | \n", "C3852953 | \n", "Pulmonary Arterial Remodeling | \n", "MSH | \n", "
22231 | \n", "C0000846 | \n", "atresia | \n", "MSH | \n", "
22232 | \n", "C0220810 | \n", "atresia | \n", "MSH | \n", "
22233 | \n", "C0243066 | \n", "atresia | \n", "MSH | \n", "
22234 rows × 3 columns
\n", "\n", " | rna_id | \n", "causality | \n", "type | \n", "name | \n", "source_id | \n", "source_name | \n", "rna_category | \n", "disease_id | \n", "vocab | \n", "
---|---|---|---|---|---|---|---|---|---|
0 | \n", "hsa-mir-143 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Colonic Neoplasms | \n", "5 | \n", "HMDD v3.2 | \n", "miRNA | \n", "C0007102 | \n", "MSH | \n", "
1 | \n", "hsa-mir-143 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Colonic Neoplasms | \n", "5 | \n", "HMDD v3.2 | \n", "miRNA | \n", "C0009375 | \n", "MSH | \n", "
2 | \n", "hsa-mir-145 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Colonic Neoplasms | \n", "5 | \n", "HMDD v3.2 | \n", "miRNA | \n", "C0007102 | \n", "MSH | \n", "
3 | \n", "hsa-mir-145 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Colonic Neoplasms | \n", "5 | \n", "HMDD v3.2 | \n", "miRNA | \n", "C0009375 | \n", "MSH | \n", "
4 | \n", "hsa-let-7g | \n", "no | \n", "circulation_biomarker_diagnosis_ns | \n", "Colonic Neoplasms | \n", "5 | \n", "HMDD v3.2 | \n", "miRNA | \n", "C0007102 | \n", "MSH | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
587833 | \n", "UCA1 | \n", "ns | \n", "Regulation [down-regulated] | \n", "Lithiasis | \n", "6 | \n", "LncRNADisease | \n", "lncRNA | \n", "C0023869 | \n", "MSH | \n", "
587834 | \n", "Uph | \n", "ns | \n", "Locus | \n", "Right ventricle hypoplasia | \n", "6 | \n", "LncRNADisease | \n", "lncRNA | \n", "C1848587 | \n", "MSH | \n", "
587835 | \n", "XIST | \n", "ns | \n", "Regulation [up-regulated] | \n", "collecting duct carcinoma | \n", "6 | \n", "LncRNADisease | \n", "lncRNA | \n", "C0007134 | \n", "DO | \n", "
587836 | \n", "XIST | \n", "ns | \n", "Regulation [up-regulated] | \n", "collecting duct carcinoma | \n", "6 | \n", "LncRNADisease | \n", "lncRNA | \n", "C1266044 | \n", "DO | \n", "
587837 | \n", "XIST | \n", "ns | \n", "Regulation [up-regulated] | \n", "collecting duct carcinoma | \n", "6 | \n", "LncRNADisease | \n", "lncRNA | \n", "C4049328 | \n", "DO | \n", "
587838 rows × 9 columns
\n", "\n", " | rna_id | \n", "rna_category | \n", "source_id | \n", "
---|---|---|---|
0 | \n", "hsa-mir-143 | \n", "miRNA | \n", "5 | \n", "
2 | \n", "hsa-mir-145 | \n", "miRNA | \n", "5 | \n", "
4 | \n", "hsa-let-7g | \n", "miRNA | \n", "5 | \n", "
6 | \n", "hsa-mir-155 | \n", "miRNA | \n", "5 | \n", "
10 | \n", "hsa-mir-141 | \n", "miRNA | \n", "5 | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "
587803 | \n", "STAT3 | \n", "circRNA | \n", "6 | \n", "
587814 | \n", "tie-1as | \n", "lncRNA | \n", "6 | \n", "
587827 | \n", "uc.77 | \n", "lncRNA | \n", "6 | \n", "
587830 | \n", "uc057pde.1 | \n", "lncRNA | \n", "6 | \n", "
587834 | \n", "Uph | \n", "lncRNA | \n", "6 | \n", "
19918 rows × 3 columns
\n", "\n", " | rna_id | \n", "rna_category | \n", "type | \n", "disease_id | \n", "causality | \n", "source_id | \n", "
---|---|---|---|---|---|---|
0 | \n", "hsa-mir-143 | \n", "miRNA | \n", "circulation_biomarker_diagnosis_down | \n", "C0007102 | \n", "no | \n", "5 | \n", "
1 | \n", "hsa-mir-143 | \n", "miRNA | \n", "circulation_biomarker_diagnosis_down | \n", "C0009375 | \n", "no | \n", "5 | \n", "
2 | \n", "hsa-mir-145 | \n", "miRNA | \n", "circulation_biomarker_diagnosis_down | \n", "C0007102 | \n", "no | \n", "5 | \n", "
3 | \n", "hsa-mir-145 | \n", "miRNA | \n", "circulation_biomarker_diagnosis_down | \n", "C0009375 | \n", "no | \n", "5 | \n", "
4 | \n", "hsa-let-7g | \n", "miRNA | \n", "circulation_biomarker_diagnosis_ns | \n", "C0007102 | \n", "no | \n", "5 | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
587833 | \n", "UCA1 | \n", "lncRNA | \n", "Regulation [down-regulated] | \n", "C0023869 | \n", "ns | \n", "6 | \n", "
587834 | \n", "Uph | \n", "lncRNA | \n", "Locus | \n", "C1848587 | \n", "ns | \n", "6 | \n", "
587835 | \n", "XIST | \n", "lncRNA | \n", "Regulation [up-regulated] | \n", "C0007134 | \n", "ns | \n", "6 | \n", "
587836 | \n", "XIST | \n", "lncRNA | \n", "Regulation [up-regulated] | \n", "C1266044 | \n", "ns | \n", "6 | \n", "
587837 | \n", "XIST | \n", "lncRNA | \n", "Regulation [up-regulated] | \n", "C4049328 | \n", "ns | \n", "6 | \n", "
585303 rows × 6 columns
\n", "\n", " | rna_id | \n", "causality | \n", "type | \n", "name | \n", "source_id | \n", "source_name | \n", "rna_category | \n", "disease_id | \n", "vocab | \n", "
---|---|---|---|---|---|---|---|---|---|
0 | \n", "hsa-mir-143 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Colonic Neoplasms | \n", "5 | \n", "HMDD v3.2 | \n", "miRNA | \n", "C0007102 | \n", "MSH | \n", "
1 | \n", "hsa-mir-143 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Colonic Neoplasms | \n", "5 | \n", "HMDD v3.2 | \n", "miRNA | \n", "C0009375 | \n", "MSH | \n", "
2 | \n", "hsa-mir-145 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Colonic Neoplasms | \n", "5 | \n", "HMDD v3.2 | \n", "miRNA | \n", "C0007102 | \n", "MSH | \n", "
3 | \n", "hsa-mir-145 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Colonic Neoplasms | \n", "5 | \n", "HMDD v3.2 | \n", "miRNA | \n", "C0009375 | \n", "MSH | \n", "
4 | \n", "hsa-let-7g | \n", "no | \n", "circulation_biomarker_diagnosis_ns | \n", "Colonic Neoplasms | \n", "5 | \n", "HMDD v3.2 | \n", "miRNA | \n", "C0007102 | \n", "MSH | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
587833 | \n", "UCA1 | \n", "ns | \n", "Regulation [down-regulated] | \n", "Lithiasis | \n", "6 | \n", "LncRNADisease | \n", "lncRNA | \n", "C0023869 | \n", "MSH | \n", "
587834 | \n", "Uph | \n", "ns | \n", "Locus | \n", "Right ventricle hypoplasia | \n", "6 | \n", "LncRNADisease | \n", "lncRNA | \n", "C1848587 | \n", "MSH | \n", "
587835 | \n", "XIST | \n", "ns | \n", "Regulation [up-regulated] | \n", "collecting duct carcinoma | \n", "6 | \n", "LncRNADisease | \n", "lncRNA | \n", "C0007134 | \n", "DO | \n", "
587836 | \n", "XIST | \n", "ns | \n", "Regulation [up-regulated] | \n", "collecting duct carcinoma | \n", "6 | \n", "LncRNADisease | \n", "lncRNA | \n", "C1266044 | \n", "DO | \n", "
587837 | \n", "XIST | \n", "ns | \n", "Regulation [up-regulated] | \n", "collecting duct carcinoma | \n", "6 | \n", "LncRNADisease | \n", "lncRNA | \n", "C4049328 | \n", "DO | \n", "
587838 rows × 9 columns
\n", "\n", " | rna_id | \n", "name | \n", "disease_id | \n", "
---|---|---|---|
102517 | \n", "HOTAIR | \n", "stomach cancer | \n", "81 | \n", "
138838 | \n", "UCA1 | \n", "stomach cancer | \n", "81 | \n", "
74767 | \n", "CDKN2B-AS1 | \n", "coronary artery disease | \n", "80 | \n", "
123932 | \n", "MALAT1 | \n", "stomach cancer | \n", "63 | \n", "
100948 | \n", "H19 | \n", "stomach cancer | \n", "63 | \n", "
131486 | \n", "PVT1 | \n", "stomach cancer | \n", "63 | \n", "
123838 | \n", "MALAT1 | \n", "breast cancer | \n", "60 | \n", "
103698 | \n", "IPW | \n", "Prader-Willi syndrome | \n", "60 | \n", "
102420 | \n", "HOTAIR | \n", "breast cancer | \n", "60 | \n", "
74044 | \n", "CASC15 | \n", "stomach cancer | \n", "54 | \n", "
74754 | \n", "CDKN2B-AS1 | \n", "breast cancer | \n", "54 | \n", "
99959 | \n", "GAS5 | \n", "stomach cancer | \n", "54 | \n", "
100855 | \n", "H19 | \n", "breast cancer | \n", "54 | \n", "
123874 | \n", "MALAT1 | \n", "hepatocellular carcinoma | \n", "50 | \n", "
124402 | \n", "MEG3 | \n", "lung cancer | \n", "48 | \n", "
102473 | \n", "HOTAIR | \n", "lung cancer | \n", "48 | \n", "
102503 | \n", "HOTAIR | \n", "prostate cancer | \n", "48 | \n", "
102569 | \n", "HOTTIP | \n", "stomach cancer | \n", "45 | \n", "
76610 | \n", "CYTOR | \n", "stomach cancer | \n", "45 | \n", "
74432 | \n", "CCAT1 | \n", "stomach cancer | \n", "45 | \n", "
\n", " | rna_id | \n", "name | \n", "disease_id | \n", "
---|---|---|---|
3077 | \n", "hsa-mir-21 | \n", "Colorectal Neoplasms | \n", "30 | \n", "
1395 | \n", "hsa-mir-145 | \n", "Colorectal Neoplasms | \n", "26 | \n", "
4514 | \n", "hsa-mir-34a | \n", "Colorectal Neoplasms | \n", "26 | \n", "
1326 | \n", "hsa-mir-143 | \n", "Colorectal Neoplasms | \n", "22 | \n", "
1967 | \n", "hsa-mir-17 | \n", "Colorectal Neoplasms | \n", "22 | \n", "
2835 | \n", "hsa-mir-200c | \n", "Colorectal Neoplasms | \n", "20 | \n", "
4192 | \n", "hsa-mir-31 | \n", "Colorectal Neoplasms | \n", "20 | \n", "
1425 | \n", "hsa-mir-145 | \n", "Urinary Bladder Neoplasms | \n", "20 | \n", "
1358 | \n", "hsa-mir-143 | \n", "Urinary Bladder Neoplasms | \n", "18 | \n", "
2998 | \n", "hsa-mir-20a | \n", "Colorectal Neoplasms | \n", "18 | \n", "
3875 | \n", "hsa-mir-29a | \n", "Colorectal Neoplasms | \n", "18 | \n", "
785 | \n", "hsa-mir-126 | \n", "Colorectal Neoplasms | \n", "18 | \n", "
3076 | \n", "hsa-mir-21 | \n", "Colonic Neoplasms | \n", "18 | \n", "
2781 | \n", "hsa-mir-200a | \n", "Colorectal Neoplasms | \n", "18 | \n", "
527 | \n", "hsa-mir-122 | \n", "Carcinoma, Hepatocellular | \n", "17 | \n", "
2658 | \n", "hsa-mir-19a | \n", "Colorectal Neoplasms | \n", "16 | \n", "
2867 | \n", "hsa-mir-203 | \n", "Colorectal Neoplasms | \n", "16 | \n", "
3245 | \n", "hsa-mir-215 | \n", "Colorectal Neoplasms | \n", "16 | \n", "
3062 | \n", "hsa-mir-21 | \n", "Carcinoma, Hepatocellular | \n", "15 | \n", "
1325 | \n", "hsa-mir-143 | \n", "Colonic Neoplasms | \n", "14 | \n", "
\n", " | rna_id | \n", "name | \n", "disease_id | \n", "
---|---|---|---|
138745 | \n", "UCA1 | \n", "stomach cancer | \n", "81 | \n", "
102471 | \n", "HOTAIR | \n", "stomach cancer | \n", "81 | \n", "
74756 | \n", "CDKN2B-AS1 | \n", "coronary artery disease | \n", "80 | \n", "
100906 | \n", "H19 | \n", "stomach cancer | \n", "63 | \n", "
123885 | \n", "MALAT1 | \n", "stomach cancer | \n", "63 | \n", "
123791 | \n", "MALAT1 | \n", "breast cancer | \n", "60 | \n", "
103652 | \n", "IPW | \n", "Prader-Willi syndrome | \n", "60 | \n", "
102374 | \n", "HOTAIR | \n", "breast cancer | \n", "60 | \n", "
74743 | \n", "CDKN2B-AS1 | \n", "breast cancer | \n", "54 | \n", "
131421 | \n", "PVT1 | \n", "stomach cancer | \n", "54 | \n", "
100813 | \n", "H19 | \n", "breast cancer | \n", "54 | \n", "
99919 | \n", "GAS5 | \n", "stomach cancer | \n", "54 | \n", "
123827 | \n", "MALAT1 | \n", "hepatocellular carcinoma | \n", "50 | \n", "
124351 | \n", "MEG3 | \n", "lung cancer | \n", "48 | \n", "
102427 | \n", "HOTAIR | \n", "lung cancer | \n", "48 | \n", "
102457 | \n", "HOTAIR | \n", "prostate cancer | \n", "48 | \n", "
74422 | \n", "CCAT1 | \n", "stomach cancer | \n", "45 | \n", "
102523 | \n", "HOTTIP | \n", "stomach cancer | \n", "45 | \n", "
76588 | \n", "CYTOR | \n", "stomach cancer | \n", "45 | \n", "
128615 | \n", "PCA3 | \n", "prostate cancer | \n", "42 | \n", "
\n", " | rna_id | \n", "name | \n", "disease_id | \n", "
---|---|---|---|
246 | \n", "hsa-circRNA11783-2 | \n", "coronary artery disease | \n", "20 | \n", "
366 | \n", "hsa_circ_0000181 | \n", "stomach cancer | \n", "18 | \n", "
357 | \n", "hsa_circ_0000026 | \n", "stomach cancer | \n", "18 | \n", "
280 | \n", "hsa_circRNA_100269 | \n", "stomach cancer | \n", "18 | \n", "
545 | \n", "hsa_circ_0061276 | \n", "stomach cancer | \n", "18 | \n", "
12 | \n", "CDKN2B-AS1 | \n", "arteriosclerotic cardiovascular disease | \n", "18 | \n", "
399 | \n", "hsa_circ_0001017 | \n", "stomach cancer | \n", "18 | \n", "
10 | \n", "CASC15 | \n", "stomach cancer | \n", "18 | \n", "
124 | \n", "circ-ZFR | \n", "stomach cancer | \n", "18 | \n", "
332 | \n", "hsa_circRNA_104423 | \n", "stomach cancer | \n", "18 | \n", "
339 | \n", "hsa_circRNA_104916 | \n", "stomach cancer | \n", "18 | \n", "
291 | \n", "hsa_circRNA_101308 | \n", "stomach cancer | \n", "18 | \n", "
155 | \n", "circMAN2B2 | \n", "lung cancer | \n", "16 | \n", "
112 | \n", "cir-ITCH | \n", "lung cancer | \n", "16 | \n", "
229 | \n", "circUBAP2 | \n", "lung cancer | \n", "16 | \n", "
18 | \n", "CDR1-AS | \n", "hepatocellular carcinoma | \n", "15 | \n", "
247 | \n", "hsa-circRNA11783-2 | \n", "type 2 diabetes mellitus | \n", "12 | \n", "
233 | \n", "circVRK1 | \n", "breast cancer | \n", "12 | \n", "
463 | \n", "hsa_circ_0006528 | \n", "breast cancer | \n", "12 | \n", "
419 | \n", "hsa_circ_0001785 | \n", "breast cancer | \n", "12 | \n", "
\n", " | disease counts | \n", "
---|---|
HOTAIR | \n", "937 | \n", "
MALAT1 | \n", "926 | \n", "
H19 | \n", "840 | \n", "
CDKN2B-AS1 | \n", "811 | \n", "
UCA1 | \n", "697 | \n", "
... | \n", "... | \n", "
oebiotech_13719 | \n", "1 | \n", "
hsa-mir-350 | \n", "1 | \n", "
hsa-mir-514 | \n", "1 | \n", "
A_19_P00329564 | \n", "1 | \n", "
A_21_P0006993 | \n", "1 | \n", "
19914 rows × 1 columns
\n", "\n", " | disease counts | \n", "
---|---|
hsa-mir-21 | \n", "364 | \n", "
hsa-mir-155 | \n", "244 | \n", "
hsa-mir-146a | \n", "207 | \n", "
hsa-mir-34a | \n", "172 | \n", "
hsa-mir-17 | \n", "170 | \n", "
hsa-mir-126 | \n", "159 | \n", "
hsa-mir-223 | \n", "154 | \n", "
hsa-mir-221 | \n", "141 | \n", "
hsa-mir-145 | \n", "140 | \n", "
hsa-mir-20a | \n", "125 | \n", "
\n", " | disease counts | \n", "
---|---|
HOTAIR | \n", "937 | \n", "
MALAT1 | \n", "926 | \n", "
H19 | \n", "840 | \n", "
CDKN2B-AS1 | \n", "792 | \n", "
UCA1 | \n", "697 | \n", "
... | \n", "... | \n", "
TCONS_00026102 | \n", "1 | \n", "
oebiotech_17301 | \n", "1 | \n", "
ASAP1 | \n", "1 | \n", "
AQP9 | \n", "1 | \n", "
RP11-68I3.11 | \n", "1 | \n", "
18494 rows × 1 columns
\n", "\n", " | disease counts | \n", "
---|---|
CDR1-AS | \n", "44 | \n", "
hsa_circ_0000284 | \n", "38 | \n", "
hsa-circRNA11783-2 | \n", "32 | \n", "
circPVT1 | \n", "27 | \n", "
hsa_circ_0001649 | \n", "25 | \n", "
... | \n", "... | \n", "
hsa_circ_0057093 | \n", "1 | \n", "
hsa_circ_0023117 | \n", "1 | \n", "
hsa_circ_0008797 | \n", "1 | \n", "
circRNA_100782 | \n", "1 | \n", "
hsa_circ_0001946 | \n", "1 | \n", "
559 rows × 1 columns
\n", "\n", " | index | \n", "disease counts | \n", "ncRNA | \n", "
---|---|---|---|
0 | \n", "hsa-mir-21 | \n", "364 | \n", "miRNA | \n", "
1 | \n", "hsa-mir-155 | \n", "244 | \n", "miRNA | \n", "
2 | \n", "hsa-mir-146a | \n", "207 | \n", "miRNA | \n", "
3 | \n", "hsa-mir-34a | \n", "172 | \n", "miRNA | \n", "
4 | \n", "hsa-mir-17 | \n", "170 | \n", "miRNA | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "
554 | \n", "hsa_circ_0057093 | \n", "1 | \n", "circRNA | \n", "
555 | \n", "hsa_circ_0023117 | \n", "1 | \n", "circRNA | \n", "
556 | \n", "hsa_circ_0008797 | \n", "1 | \n", "circRNA | \n", "
557 | \n", "circRNA_100782 | \n", "1 | \n", "circRNA | \n", "
558 | \n", "hsa_circ_0001946 | \n", "1 | \n", "circRNA | \n", "
19919 rows × 3 columns
\n", "\n", " | class_name | \n", "class_range | \n", "
---|---|---|
0 | \n", "Certain conditions originating in the perinata... | \n", "P00-P96 | \n", "
1 | \n", "Certain infectious and parasitic diseases | \n", "A00-B99 | \n", "
2 | \n", "Codes for special purposes | \n", "U00-U85 | \n", "
3 | \n", "Congenital malformations, deformations and chr... | \n", "Q00-Q99 | \n", "
4 | \n", "Diseases of the blood and blood-forming organs... | \n", "D50-D89 | \n", "
5 | \n", "Diseases of the circulatory system | \n", "I00-I99 | \n", "
6 | \n", "Diseases of the digestive system | \n", "K00-K93 | \n", "
7 | \n", "Diseases of the ear and mastoid process | \n", "H60-H95 | \n", "
8 | \n", "Diseases of the eye and adnexa | \n", "H00-H59 | \n", "
9 | \n", "Diseases of the genitourinary system | \n", "N00-N99 | \n", "
10 | \n", "Diseases of the musculoskeletal system and con... | \n", "M00-M99 | \n", "
11 | \n", "Diseases of the nervous system | \n", "G00-G99 | \n", "
12 | \n", "Diseases of the respiratory system | \n", "J00-J99 | \n", "
13 | \n", "Diseases of the skin and subcutaneous tissue | \n", "L00-L99 | \n", "
14 | \n", "Endocrine, nutritional and metabolic diseases | \n", "E00-E90 | \n", "
15 | \n", "External causes of morbidity and mortality | \n", "V01-Y98 | \n", "
16 | \n", "Factors influencing health status and contact ... | \n", "Z00-Z99 | \n", "
17 | \n", "Injury, poisoning and certain other consequenc... | \n", "S00-T98 | \n", "
18 | \n", "Mental and behavioural disorders | \n", "F00-F99 | \n", "
19 | \n", "Neoplasms | \n", "C00-D48 | \n", "
20 | \n", "Pregnancy, childbirth and the puerperium | \n", "O00-O099 | \n", "
21 | \n", "Symptoms, signs and abnormal clinical and labo... | \n", "R00-R99 | \n", "
\n", " | disease_id | \n", "class_name | \n", "class_range | \n", "
---|---|---|---|
0 | \n", "C0008354 | \n", "Certain infectious and parasitic diseases | \n", "A00-B99 | \n", "
1 | \n", "C0178238 | \n", "Certain infectious and parasitic diseases | \n", "A00-B99 | \n", "
2 | \n", "C0041466 | \n", "Certain infectious and parasitic diseases | \n", "A00-B99 | \n", "
3 | \n", "C0030528 | \n", "Certain infectious and parasitic diseases | \n", "A00-B99 | \n", "
4 | \n", "C0152491 | \n", "Certain infectious and parasitic diseases | \n", "A00-B99 | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "
3613 | \n", "C0013182 | \n", "Injury, poisoning and certain other consequenc... | \n", "S00-T98 | \n", "
3614 | \n", "C0041755 | \n", "Injury, poisoning and certain other consequenc... | \n", "S00-T98 | \n", "
3615 | \n", "C0085639 | \n", "External causes of morbidity and mortality | \n", "V01-Y98 | \n", "
3616 | \n", "C0019699 | \n", "Factors influencing health status and contact ... | \n", "Z00-Z99 | \n", "
3617 | \n", "C0037316 | \n", "Factors influencing health status and contact ... | \n", "Z00-Z99 | \n", "
3618 rows × 3 columns
\n", "\n", " | disease_id | \n", "gene_id | \n", "source_id | \n", "score | \n", "sio_id | \n", "
---|---|---|---|---|---|
0 | \n", "C0000731 | \n", "72 | \n", "1 | \n", "0.10 | \n", "SIO_001121 | \n", "
1 | \n", "C0000731 | \n", "672 | \n", "1 | \n", "0.10 | \n", "SIO_001121 | \n", "
2 | \n", "C0000731 | \n", "1280 | \n", "1 | \n", "0.10 | \n", "SIO_001121 | \n", "
3 | \n", "C0000731 | \n", "1482 | \n", "1 | \n", "0.10 | \n", "SIO_001121 | \n", "
4 | \n", "C0000731 | \n", "1811 | \n", "1 | \n", "0.10 | \n", "SIO_001121 | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
358204 | \n", "C4540535 | \n", "2778 | \n", "1 | \n", "0.30 | \n", "SIO_001122 | \n", "
358205 | \n", "C4540536 | \n", "2778 | \n", "1 | \n", "0.30 | \n", "SIO_001122 | \n", "
358206 | \n", "C4540602 | \n", "2778 | \n", "1 | \n", "0.30 | \n", "SIO_001122 | \n", "
358207 | \n", "C4543926 | \n", "3060 | \n", "1 | \n", "0.03 | \n", "SIO_001121 | \n", "
358208 | \n", "C4545381 | \n", "5156 | \n", "1 | \n", "0.30 | \n", "SIO_001348 | \n", "
358209 rows × 5 columns
\n", "\n", " | disease_id | \n", "gene_id | \n", "class_range | \n", "icd_class_name | \n", "class_name | \n", "
---|---|---|---|---|---|
0 | \n", "C0000744 | \n", "25 | \n", "E00-E90 | \n", "Endocrine, nutritional and metabolic diseases | \n", "Metabolic | \n", "
1 | \n", "C0000744 | \n", "27 | \n", "E00-E90 | \n", "Endocrine, nutritional and metabolic diseases | \n", "Metabolic | \n", "
2 | \n", "C0000744 | \n", "238 | \n", "E00-E90 | \n", "Endocrine, nutritional and metabolic diseases | \n", "Metabolic | \n", "
3 | \n", "C0000744 | \n", "338 | \n", "E00-E90 | \n", "Endocrine, nutritional and metabolic diseases | \n", "Metabolic | \n", "
4 | \n", "C0000744 | \n", "348 | \n", "E00-E90 | \n", "Endocrine, nutritional and metabolic diseases | \n", "Metabolic | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
118041 | \n", "C1691779 | \n", "2707 | \n", "H60-H95 | \n", "Diseases of the ear and mastoid process | \n", "Ear | \n", "
118042 | \n", "C1691779 | \n", "4036 | \n", "H60-H95 | \n", "Diseases of the ear and mastoid process | \n", "Ear | \n", "
118043 | \n", "C1691779 | \n", "5172 | \n", "H60-H95 | \n", "Diseases of the ear and mastoid process | \n", "Ear | \n", "
118044 | \n", "C1691779 | \n", "8772 | \n", "H60-H95 | \n", "Diseases of the ear and mastoid process | \n", "Ear | \n", "
118045 | \n", "C1691779 | \n", "10265 | \n", "H60-H95 | \n", "Diseases of the ear and mastoid process | \n", "Ear | \n", "
118046 rows × 5 columns
\n", "\n", " | class_name | \n", "disease_id | \n", "num_feature_disease | \n", "caracteristica | \n", "
---|---|---|---|---|
0 | \n", "Circulatory | \n", "C0002940 | \n", "56 | \n", "genes | \n", "
1 | \n", "Circulatory | \n", "C0002962 | \n", "54 | \n", "genes | \n", "
2 | \n", "Circulatory | \n", "C0002963 | \n", "1 | \n", "genes | \n", "
3 | \n", "Circulatory | \n", "C0002965 | \n", "19 | \n", "genes | \n", "
4 | \n", "Circulatory | \n", "C0003486 | \n", "95 | \n", "genes | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
2796 | \n", "Skin | \n", "C0702166 | \n", "44 | \n", "genes | \n", "
2797 | \n", "Skin | \n", "C1112570 | \n", "4 | \n", "genes | \n", "
2798 | \n", "Skin | \n", "C1260874 | \n", "1 | \n", "genes | \n", "
2799 | \n", "Skin | \n", "C2936846 | \n", "1 | \n", "genes | \n", "
2800 | \n", "Skin | \n", "C4083212 | \n", "19 | \n", "genes | \n", "
2801 rows × 4 columns
\n", "\n", " | disease_id | \n", "gene_id | \n", "class_range | \n", "icd_class_name | \n", "
---|---|---|---|---|
class_name | \n", "\n", " | \n", " | \n", " | \n", " |
Circulatory | \n", "8345 | \n", "8345 | \n", "8345 | \n", "8345 | \n", "
Congenital | \n", "11574 | \n", "11574 | \n", "11574 | \n", "11574 | \n", "
Digestive | \n", "8108 | \n", "8108 | \n", "8108 | \n", "8108 | \n", "
Ear | \n", "1770 | \n", "1770 | \n", "1770 | \n", "1770 | \n", "
Eye | \n", "5541 | \n", "5541 | \n", "5541 | \n", "5541 | \n", "
Genitourinary | \n", "3810 | \n", "3810 | \n", "3810 | \n", "3810 | \n", "
Immunitary | \n", "3385 | \n", "3385 | \n", "3385 | \n", "3385 | \n", "
Infectious | \n", "3651 | \n", "3651 | \n", "3651 | \n", "3651 | \n", "
Mental | \n", "10566 | \n", "10566 | \n", "10566 | \n", "10566 | \n", "
Metabolic | \n", "9825 | \n", "9825 | \n", "9825 | \n", "9825 | \n", "
Musculoskeletal | \n", "8066 | \n", "8066 | \n", "8066 | \n", "8066 | \n", "
Neoplasms | \n", "27447 | \n", "27447 | \n", "27447 | \n", "27447 | \n", "
Nervous | \n", "9167 | \n", "9167 | \n", "9167 | \n", "9167 | \n", "
Perinatal | \n", "497 | \n", "497 | \n", "497 | \n", "497 | \n", "
Pregnancy | \n", "262 | \n", "262 | \n", "262 | \n", "262 | \n", "
Respiratory | \n", "2800 | \n", "2800 | \n", "2800 | \n", "2800 | \n", "
Skin | \n", "3232 | \n", "3232 | \n", "3232 | \n", "3232 | \n", "
\n", " | rna_id | \n", "causality | \n", "type | \n", "name | \n", "rna_category | \n", "disease_id | \n", "
---|---|---|---|---|---|---|
0 | \n", "hsa-mir-143 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Colonic Neoplasms | \n", "miRNA | \n", "C0007102 | \n", "
1 | \n", "hsa-mir-143 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Colonic Neoplasms | \n", "miRNA | \n", "C0009375 | \n", "
2 | \n", "hsa-mir-145 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Colonic Neoplasms | \n", "miRNA | \n", "C0007102 | \n", "
3 | \n", "hsa-mir-145 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Colonic Neoplasms | \n", "miRNA | \n", "C0009375 | \n", "
4 | \n", "hsa-let-7g | \n", "no | \n", "circulation_biomarker_diagnosis_ns | \n", "Colonic Neoplasms | \n", "miRNA | \n", "C0007102 | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
587833 | \n", "UCA1 | \n", "ns | \n", "Regulation [down-regulated] | \n", "Lithiasis | \n", "lncRNA | \n", "C0023869 | \n", "
587834 | \n", "Uph | \n", "ns | \n", "Locus | \n", "Right ventricle hypoplasia | \n", "lncRNA | \n", "C1848587 | \n", "
587835 | \n", "XIST | \n", "ns | \n", "Regulation [up-regulated] | \n", "collecting duct carcinoma | \n", "lncRNA | \n", "C0007134 | \n", "
587836 | \n", "XIST | \n", "ns | \n", "Regulation [up-regulated] | \n", "collecting duct carcinoma | \n", "lncRNA | \n", "C1266044 | \n", "
587837 | \n", "XIST | \n", "ns | \n", "Regulation [up-regulated] | \n", "collecting duct carcinoma | \n", "lncRNA | \n", "C4049328 | \n", "
587838 rows × 6 columns
\n", "\n", " | rna_id | \n", "causality | \n", "type | \n", "name | \n", "rna_category | \n", "disease_id | \n", "
---|---|---|---|---|---|---|
count | \n", "587838 | \n", "587838 | \n", "587838 | \n", "587838 | \n", "587838 | \n", "587838 | \n", "
unique | \n", "19914 | \n", "3 | \n", "233 | \n", "633 | \n", "3 | \n", "970 | \n", "
top | \n", "HOTAIR | \n", "ns | \n", "ns | \n", "stomach cancer | \n", "lncRNA | \n", "C0024299 | \n", "
freq | \n", "937 | \n", "575514 | \n", "541732 | \n", "127935 | \n", "572481 | \n", "14550 | \n", "
\n", " | rna_id | \n", "disease_id | \n", "class_range | \n", "icd_class_name | \n", "class_name | \n", "
---|---|---|---|---|---|
0 | \n", "hsa-mir-143 | \n", "C0007102 | \n", "C00-D48 | \n", "Neoplasms | \n", "Neoplasms | \n", "
1 | \n", "hsa-mir-145 | \n", "C0007102 | \n", "C00-D48 | \n", "Neoplasms | \n", "Neoplasms | \n", "
2 | \n", "hsa-let-7g | \n", "C0007102 | \n", "C00-D48 | \n", "Neoplasms | \n", "Neoplasms | \n", "
3 | \n", "hsa-mir-155 | \n", "C0007102 | \n", "C00-D48 | \n", "Neoplasms | \n", "Neoplasms | \n", "
4 | \n", "hsa-mir-145 | \n", "C0007102 | \n", "C00-D48 | \n", "Neoplasms | \n", "Neoplasms | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
232026 | \n", "hsa-mir-182 | \n", "C0018776 | \n", "H60-H95 | \n", "Diseases of the ear and mastoid process | \n", "Ear | \n", "
232027 | \n", "hsa-mir-183 | \n", "C0018776 | \n", "H60-H95 | \n", "Diseases of the ear and mastoid process | \n", "Ear | \n", "
232028 | \n", "hsa-mir-96 | \n", "C0018776 | \n", "H60-H95 | \n", "Diseases of the ear and mastoid process | \n", "Ear | \n", "
232029 | \n", "hsa-mir-183 | \n", "C0018776 | \n", "H60-H95 | \n", "Diseases of the ear and mastoid process | \n", "Ear | \n", "
232030 | \n", "hsa-mir-146b | \n", "C0029882 | \n", "H60-H95 | \n", "Diseases of the ear and mastoid process | \n", "Ear | \n", "
232031 rows × 5 columns
\n", "\n", " | class_name | \n", "disease_id | \n", "num_feature_disease | \n", "caracteristica | \n", "
---|---|---|---|---|
0 | \n", "Circulatory | \n", "C0002940 | \n", "1 | \n", "ncRNA | \n", "
1 | \n", "Circulatory | \n", "C0003486 | \n", "129 | \n", "ncRNA | \n", "
2 | \n", "Circulatory | \n", "C0003811 | \n", "20 | \n", "ncRNA | \n", "
3 | \n", "Circulatory | \n", "C0003850 | \n", "135 | \n", "ncRNA | \n", "
4 | \n", "Circulatory | \n", "C0004153 | \n", "301 | \n", "ncRNA | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
449 | \n", "Skin | \n", "C0042900 | \n", "3 | \n", "ncRNA | \n", "
450 | \n", "Skin | \n", "C0162810 | \n", "15 | \n", "ncRNA | \n", "
451 | \n", "Skin | \n", "C0162820 | \n", "2 | \n", "ncRNA | \n", "
452 | \n", "Skin | \n", "C0162836 | \n", "1 | \n", "ncRNA | \n", "
453 | \n", "Skin | \n", "C0702166 | \n", "10 | \n", "ncRNA | \n", "
454 rows × 4 columns
\n", "\n", " | num_feature_disease | \n", "
---|---|
class_name | \n", "\n", " |
Circulatory | \n", "5310 | \n", "
Congenital | \n", "4083 | \n", "
Digestive | \n", "1146 | \n", "
Ear | \n", "23 | \n", "
Eye | \n", "293 | \n", "
Genitourinary | \n", "964 | \n", "
Immunitary | \n", "436 | \n", "
Infectious | \n", "5120 | \n", "
Mental | \n", "4159 | \n", "
Metabolic | \n", "2453 | \n", "
Musculoskeletal | \n", "749 | \n", "
Neoplasms | \n", "193696 | \n", "
Nervous | \n", "12389 | \n", "
Perinatal | \n", "149 | \n", "
Pregnancy | \n", "371 | \n", "
Respiratory | \n", "354 | \n", "
Skin | \n", "336 | \n", "
\n", " | disease_id | \n", "variant_id | \n", "source_id | \n", "score | \n", "
---|---|---|---|---|
0 | \n", "C0000737 | \n", "rs1057518806 | \n", "1 | \n", "0.70 | \n", "
1 | \n", "C0000737 | \n", "rs1057518886 | \n", "1 | \n", "0.70 | \n", "
2 | \n", "C0000744 | \n", "rs146064714 | \n", "1 | \n", "0.70 | \n", "
3 | \n", "C0000744 | \n", "rs199422219 | \n", "1 | \n", "0.70 | \n", "
4 | \n", "C0000744 | \n", "rs199422220 | \n", "1 | \n", "0.80 | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
210493 | \n", "C4540536 | \n", "rs148033592 | \n", "1 | \n", "0.70 | \n", "
210494 | \n", "C4540536 | \n", "rs61749698 | \n", "1 | \n", "0.70 | \n", "
210495 | \n", "C4540602 | \n", "rs148033592 | \n", "1 | \n", "0.70 | \n", "
210496 | \n", "C4540602 | \n", "rs61749698 | \n", "1 | \n", "0.70 | \n", "
210497 | \n", "C4543822 | \n", "rs1044396 | \n", "1 | \n", "0.01 | \n", "
210498 rows × 4 columns
\n", "\n", " | disease_id | \n", "class_name | \n", "class_range | \n", "
---|---|---|---|
0 | \n", "C0008354 | \n", "Certain infectious and parasitic diseases | \n", "A00-B99 | \n", "
1 | \n", "C0178238 | \n", "Certain infectious and parasitic diseases | \n", "A00-B99 | \n", "
2 | \n", "C0041466 | \n", "Certain infectious and parasitic diseases | \n", "A00-B99 | \n", "
3 | \n", "C0030528 | \n", "Certain infectious and parasitic diseases | \n", "A00-B99 | \n", "
4 | \n", "C0152491 | \n", "Certain infectious and parasitic diseases | \n", "A00-B99 | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "
3613 | \n", "C0013182 | \n", "Injury, poisoning and certain other consequenc... | \n", "S00-T98 | \n", "
3614 | \n", "C0041755 | \n", "Injury, poisoning and certain other consequenc... | \n", "S00-T98 | \n", "
3615 | \n", "C0085639 | \n", "External causes of morbidity and mortality | \n", "V01-Y98 | \n", "
3616 | \n", "C0019699 | \n", "Factors influencing health status and contact ... | \n", "Z00-Z99 | \n", "
3617 | \n", "C0037316 | \n", "Factors influencing health status and contact ... | \n", "Z00-Z99 | \n", "
3618 rows × 3 columns
\n", "\n", " | class_name | \n", "disease_id | \n", "num_feature_disease | \n", "caracteristica | \n", "
---|---|---|---|---|
0 | \n", "Circulatory | \n", "C0002940 | \n", "7 | \n", "variants | \n", "
1 | \n", "Circulatory | \n", "C0002962 | \n", "64 | \n", "variants | \n", "
2 | \n", "Circulatory | \n", "C0002963 | \n", "2 | \n", "variants | \n", "
3 | \n", "Circulatory | \n", "C0002965 | \n", "4 | \n", "variants | \n", "
4 | \n", "Circulatory | \n", "C0003486 | \n", "9 | \n", "variants | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
1623 | \n", "Skin | \n", "C0406317 | \n", "1 | \n", "variants | \n", "
1624 | \n", "Skin | \n", "C0409974 | \n", "17 | \n", "variants | \n", "
1625 | \n", "Skin | \n", "C0477474 | \n", "1 | \n", "variants | \n", "
1626 | \n", "Skin | \n", "C0702166 | \n", "8 | \n", "variants | \n", "
1627 | \n", "Skin | \n", "C4083212 | \n", "2 | \n", "variants | \n", "
1628 rows × 4 columns
\n", "\n", " | disease_id | \n", "pathway_id | \n", "
---|---|---|
0 | \n", "C0000731 | \n", "WP117 | \n", "
1 | \n", "C0000731 | \n", "WP138 | \n", "
2 | \n", "C0000731 | \n", "WP15 | \n", "
3 | \n", "C0000731 | \n", "WP1533 | \n", "
4 | \n", "C0000731 | \n", "WP1544 | \n", "
... | \n", "... | \n", "... | \n", "
400696 | \n", "C4540602 | \n", "WP734 | \n", "
400697 | \n", "C4545381 | \n", "WP306 | \n", "
400698 | \n", "C4545381 | \n", "WP322 | \n", "
400699 | \n", "C4545381 | \n", "WP3611 | \n", "
400700 | \n", "C4545381 | \n", "WP51 | \n", "
400701 rows × 2 columns
\n", "\n", " | class_name | \n", "disease_id | \n", "num_feature_disease | \n", "caracteristica | \n", "
---|---|---|---|---|
0 | \n", "Circulatory | \n", "C0002940 | \n", "120 | \n", "pathway | \n", "
1 | \n", "Circulatory | \n", "C0002962 | \n", "96 | \n", "pathway | \n", "
2 | \n", "Circulatory | \n", "C0002963 | \n", "8 | \n", "pathway | \n", "
3 | \n", "Circulatory | \n", "C0002965 | \n", "79 | \n", "pathway | \n", "
4 | \n", "Circulatory | \n", "C0003486 | \n", "139 | \n", "pathway | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
2423 | \n", "Skin | \n", "C0549567 | \n", "9 | \n", "pathway | \n", "
2424 | \n", "Skin | \n", "C0600336 | \n", "1 | \n", "pathway | \n", "
2425 | \n", "Skin | \n", "C0702166 | \n", "81 | \n", "pathway | \n", "
2426 | \n", "Skin | \n", "C1112570 | \n", "4 | \n", "pathway | \n", "
2427 | \n", "Skin | \n", "C4083212 | \n", "31 | \n", "pathway | \n", "
2428 rows × 4 columns
\n", "\n", " | rna_id | \n", "causality | \n", "type | \n", "name | \n", "rna_category | \n", "disease_id | \n", "
---|---|---|---|---|---|---|
0 | \n", "hsa-mir-143 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Colonic Neoplasms | \n", "miRNA | \n", "C0007102 | \n", "
1 | \n", "hsa-mir-143 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Colonic Neoplasms | \n", "miRNA | \n", "C0009375 | \n", "
2 | \n", "hsa-mir-145 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Colonic Neoplasms | \n", "miRNA | \n", "C0007102 | \n", "
3 | \n", "hsa-mir-145 | \n", "no | \n", "circulation_biomarker_diagnosis_down | \n", "Colonic Neoplasms | \n", "miRNA | \n", "C0009375 | \n", "
4 | \n", "hsa-let-7g | \n", "no | \n", "circulation_biomarker_diagnosis_ns | \n", "Colonic Neoplasms | \n", "miRNA | \n", "C0007102 | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
587833 | \n", "UCA1 | \n", "ns | \n", "Regulation [down-regulated] | \n", "Lithiasis | \n", "lncRNA | \n", "C0023869 | \n", "
587834 | \n", "Uph | \n", "ns | \n", "Locus | \n", "Right ventricle hypoplasia | \n", "lncRNA | \n", "C1848587 | \n", "
587835 | \n", "XIST | \n", "ns | \n", "Regulation [up-regulated] | \n", "collecting duct carcinoma | \n", "lncRNA | \n", "C0007134 | \n", "
587836 | \n", "XIST | \n", "ns | \n", "Regulation [up-regulated] | \n", "collecting duct carcinoma | \n", "lncRNA | \n", "C1266044 | \n", "
587837 | \n", "XIST | \n", "ns | \n", "Regulation [up-regulated] | \n", "collecting duct carcinoma | \n", "lncRNA | \n", "C4049328 | \n", "
587838 rows × 6 columns
\n", "\n", " | rna_id | \n", "causality | \n", "type | \n", "name | \n", "rna_category | \n", "disease_id | \n", "
---|---|---|---|---|---|---|
528 | \n", "ZEB1 | \n", "ns | \n", "Expression [high expression] | \n", "Colonic Neoplasms | \n", "lncRNA | \n", "C0007102 | \n", "
529 | \n", "ZEB1 | \n", "ns | \n", "Expression [high expression] | \n", "Colonic Neoplasms | \n", "lncRNA | \n", "C0009375 | \n", "
530 | \n", "ZFAS1 | \n", "ns | \n", "Expression [high expression] | \n", "Colonic Neoplasms | \n", "lncRNA | \n", "C0007102 | \n", "
531 | \n", "ZFAS1 | \n", "ns | \n", "Expression [high expression] | \n", "Colonic Neoplasms | \n", "lncRNA | \n", "C0009375 | \n", "
2475 | \n", "E2F4 | \n", "ns | \n", "ns | \n", "Colorectal Neoplasms | \n", "lncRNA | \n", "C0009402 | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
587833 | \n", "UCA1 | \n", "ns | \n", "Regulation [down-regulated] | \n", "Lithiasis | \n", "lncRNA | \n", "C0023869 | \n", "
587834 | \n", "Uph | \n", "ns | \n", "Locus | \n", "Right ventricle hypoplasia | \n", "lncRNA | \n", "C1848587 | \n", "
587835 | \n", "XIST | \n", "ns | \n", "Regulation [up-regulated] | \n", "collecting duct carcinoma | \n", "lncRNA | \n", "C0007134 | \n", "
587836 | \n", "XIST | \n", "ns | \n", "Regulation [up-regulated] | \n", "collecting duct carcinoma | \n", "lncRNA | \n", "C1266044 | \n", "
587837 | \n", "XIST | \n", "ns | \n", "Regulation [up-regulated] | \n", "collecting duct carcinoma | \n", "lncRNA | \n", "C4049328 | \n", "
572481 rows × 6 columns
\n", "\n", " | disease_id | \n", "class_name | \n", "class_range | \n", "
---|---|---|---|
0 | \n", "C0008354 | \n", "Certain infectious and parasitic diseases | \n", "A00-B99 | \n", "
1 | \n", "C0178238 | \n", "Certain infectious and parasitic diseases | \n", "A00-B99 | \n", "
2 | \n", "C0041466 | \n", "Certain infectious and parasitic diseases | \n", "A00-B99 | \n", "
3 | \n", "C0030528 | \n", "Certain infectious and parasitic diseases | \n", "A00-B99 | \n", "
4 | \n", "C0152491 | \n", "Certain infectious and parasitic diseases | \n", "A00-B99 | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "
3613 | \n", "C0013182 | \n", "Injury, poisoning and certain other consequenc... | \n", "S00-T98 | \n", "
3614 | \n", "C0041755 | \n", "Injury, poisoning and certain other consequenc... | \n", "S00-T98 | \n", "
3615 | \n", "C0085639 | \n", "External causes of morbidity and mortality | \n", "V01-Y98 | \n", "
3616 | \n", "C0019699 | \n", "Factors influencing health status and contact ... | \n", "Z00-Z99 | \n", "
3617 | \n", "C0037316 | \n", "Factors influencing health status and contact ... | \n", "Z00-Z99 | \n", "
3618 rows × 3 columns
\n", "\n", " | class_name | \n", "disease_id | \n", "num_feature_disease | \n", "caracteristica | \n", "
---|---|---|---|---|
0 | \n", "Circulatory | \n", "C0003486 | \n", "10 | \n", "miRNA | \n", "
1 | \n", "Circulatory | \n", "C0003811 | \n", "20 | \n", "miRNA | \n", "
2 | \n", "Circulatory | \n", "C0007192 | \n", "5 | \n", "miRNA | \n", "
3 | \n", "Circulatory | \n", "C0010054 | \n", "125 | \n", "miRNA | \n", "
4 | \n", "Circulatory | \n", "C0018799 | \n", "337 | \n", "miRNA | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
195 | \n", "Skin | \n", "C0038165 | \n", "2 | \n", "miRNA | \n", "
196 | \n", "Skin | \n", "C0042900 | \n", "3 | \n", "miRNA | \n", "
197 | \n", "Skin | \n", "C0162810 | \n", "15 | \n", "miRNA | \n", "
198 | \n", "Skin | \n", "C0162820 | \n", "2 | \n", "miRNA | \n", "
199 | \n", "Skin | \n", "C0162836 | \n", "1 | \n", "miRNA | \n", "
200 rows × 4 columns
\n", "\n", " | num_feature_disease | \n", "
---|---|
class_name | \n", "\n", " |
Circulatory | \n", "782 | \n", "
Congenital | \n", "75 | \n", "
Digestive | \n", "319 | \n", "
Ear | \n", "23 | \n", "
Eye | \n", "56 | \n", "
Genitourinary | \n", "220 | \n", "
Immunitary | \n", "75 | \n", "
Infectious | \n", "488 | \n", "
Mental | \n", "179 | \n", "
Metabolic | \n", "280 | \n", "
Musculoskeletal | \n", "303 | \n", "
Neoplasms | \n", "2809 | \n", "
Nervous | \n", "171 | \n", "
Perinatal | \n", "31 | \n", "
Pregnancy | \n", "20 | \n", "
Respiratory | \n", "179 | \n", "
Skin | \n", "192 | \n", "
\n", " | class_name | \n", "disease_id | \n", "num_feature_disease | \n", "caracteristica | \n", "
---|---|---|---|---|
0 | \n", "Circulatory | \n", "C0002940 | \n", "1 | \n", "lncRNA | \n", "
1 | \n", "Circulatory | \n", "C0003486 | \n", "118 | \n", "lncRNA | \n", "
2 | \n", "Circulatory | \n", "C0003850 | \n", "131 | \n", "lncRNA | \n", "
3 | \n", "Circulatory | \n", "C0004153 | \n", "269 | \n", "lncRNA | \n", "
4 | \n", "Circulatory | \n", "C0007193 | \n", "121 | \n", "lncRNA | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
294 | \n", "Respiratory | \n", "C1260881 | \n", "1 | \n", "lncRNA | \n", "
295 | \n", "Respiratory | \n", "C1319018 | \n", "1 | \n", "lncRNA | \n", "
296 | \n", "Respiratory | \n", "C1800706 | \n", "1 | \n", "lncRNA | \n", "
297 | \n", "Skin | \n", "C0022548 | \n", "2 | \n", "lncRNA | \n", "
298 | \n", "Skin | \n", "C0033860 | \n", "122 | \n", "lncRNA | \n", "
299 rows × 4 columns
\n", "\n", " | num_feature_disease | \n", "
---|---|
class_name | \n", "\n", " |
Circulatory | \n", "4251 | \n", "
Congenital | \n", "3982 | \n", "
Digestive | \n", "769 | \n", "
Eye | \n", "237 | \n", "
Genitourinary | \n", "733 | \n", "
Immunitary | \n", "361 | \n", "
Infectious | \n", "4618 | \n", "
Mental | \n", "3955 | \n", "
Metabolic | \n", "2150 | \n", "
Musculoskeletal | \n", "414 | \n", "
Neoplasms | \n", "189868 | \n", "
Nervous | \n", "12205 | \n", "
Perinatal | \n", "118 | \n", "
Pregnancy | \n", "351 | \n", "
Respiratory | \n", "175 | \n", "
Skin | \n", "124 | \n", "
\n", " | class_name | \n", "disease_id | \n", "num_feature_disease | \n", "caracteristica | \n", "
---|---|---|---|---|
0 | \n", "Circulatory | \n", "C0003486 | \n", "1 | \n", "circRNA | \n", "
1 | \n", "Circulatory | \n", "C0003850 | \n", "4 | \n", "circRNA | \n", "
2 | \n", "Circulatory | \n", "C0004153 | \n", "32 | \n", "circRNA | \n", "
3 | \n", "Circulatory | \n", "C0007193 | \n", "1 | \n", "circRNA | \n", "
4 | \n", "Circulatory | \n", "C0010054 | \n", "32 | \n", "circRNA | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
88 | \n", "Neoplasms | \n", "C2854122 | \n", "8 | \n", "circRNA | \n", "
89 | \n", "Nervous | \n", "C0002395 | \n", "1 | \n", "circRNA | \n", "
90 | \n", "Nervous | \n", "C0026769 | \n", "12 | \n", "circRNA | \n", "
91 | \n", "Skin | \n", "C0001144 | \n", "10 | \n", "circRNA | \n", "
92 | \n", "Skin | \n", "C0702166 | \n", "10 | \n", "circRNA | \n", "
93 rows × 4 columns
\n", "\n", " | class_name | \n", "disease_id | \n", "num_feature_disease | \n", "caracteristica | \n", "
---|---|---|---|---|
0 | \n", "Circulatory | \n", "C0002940 | \n", "120 | \n", "pathway | \n", "
1 | \n", "Circulatory | \n", "C0002962 | \n", "96 | \n", "pathway | \n", "
2 | \n", "Circulatory | \n", "C0002963 | \n", "8 | \n", "pathway | \n", "
3 | \n", "Circulatory | \n", "C0002965 | \n", "79 | \n", "pathway | \n", "
4 | \n", "Circulatory | \n", "C0003486 | \n", "139 | \n", "pathway | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
88 | \n", "Neoplasms | \n", "C2854122 | \n", "8 | \n", "circRNA | \n", "
89 | \n", "Nervous | \n", "C0002395 | \n", "1 | \n", "circRNA | \n", "
90 | \n", "Nervous | \n", "C0026769 | \n", "12 | \n", "circRNA | \n", "
91 | \n", "Skin | \n", "C0001144 | \n", "10 | \n", "circRNA | \n", "
92 | \n", "Skin | \n", "C0702166 | \n", "10 | \n", "circRNA | \n", "
3020 rows × 4 columns
\n", "\n", " | class_name | \n", "disease_id | \n", "num_feature_disease | \n", "caracteristica | \n", "
---|---|---|---|---|
0 | \n", "Circulatory | \n", "C0003486 | \n", "10 | \n", "miRNA | \n", "
1 | \n", "Circulatory | \n", "C0003811 | \n", "20 | \n", "miRNA | \n", "
2 | \n", "Circulatory | \n", "C0007192 | \n", "5 | \n", "miRNA | \n", "
3 | \n", "Circulatory | \n", "C0010054 | \n", "125 | \n", "miRNA | \n", "
4 | \n", "Circulatory | \n", "C0018799 | \n", "337 | \n", "miRNA | \n", "
... | \n", "... | \n", "... | \n", "... | \n", "... | \n", "
88 | \n", "Neoplasms | \n", "C2854122 | \n", "8 | \n", "circRNA | \n", "
89 | \n", "Nervous | \n", "C0002395 | \n", "1 | \n", "circRNA | \n", "
90 | \n", "Nervous | \n", "C0026769 | \n", "12 | \n", "circRNA | \n", "
91 | \n", "Skin | \n", "C0001144 | \n", "10 | \n", "circRNA | \n", "
92 | \n", "Skin | \n", "C0702166 | \n", "10 | \n", "circRNA | \n", "
592 rows × 4 columns
\n", "