Commits · 72e7890d90ccb4c6c792f6c2c08677997e49b1e6 · COMPARA / covid_analysis

23 May, 2024 2 commits
- Preparing for ROC curve generation · 72e7890d
  Joaquin Torres authored May 23, 2024
  
  72e7890d
- Generating ROC curves for each fold in progress · 61193933
  Joaquin Torres authored May 23, 2024
  
  61193933
22 May, 2024 9 commits
- Metrics generated as expected for DT, generate curves for each cv split · b497f37d
  Joaquin Torres authored May 22, 2024
  
  b497f37d
- Testing metric generation · 44116618
  Joaquin Torres authored May 22, 2024
  
  44116618
- Getting cv metric gen ready · 97658355
  Joaquin Torres authored May 22, 2024
  
  97658355
- Regenerated hyperparams and getting cv metric gen ready · 4999db04
  Joaquin Torres authored May 22, 2024
  
  4999db04
- Ready to re run everything · 720e4ae1
  Joaquin Torres authored May 22, 2024
  
  720e4ae1
- Deleted column in results df · 1977e62f
  Joaquin Torres authored May 22, 2024
  
  1977e62f
- Found optimal hyperparamers and exported, more analysis to be done in different files · 203b75e8
  Joaquin Torres authored May 22, 2024
  
  203b75e8
- Corrected hyperparam_tuning metric computation · 620b8a59
  Joaquin Torres authored May 22, 2024
  
  620b8a59
- Corrected computation of mean and sd for hyperparameter tuning · 5b97dbfb
  Joaquin Torres authored May 22, 2024
  
  5b97dbfb
21 May, 2024 1 commit
- script prepared to compute shap values · 36a3534e
  Joaquin Torres authored May 21, 2024
  
  36a3534e
14 May, 2024 3 commits
- regen hyperparam excel · e97c990a
  Joaquin Torres authored May 14, 2024
  
  e97c990a
- Regenerated with sd and mean for cv · 05a028e5
  Joaquin Torres authored May 14, 2024
  
  05a028e5
- automated reading the parameters for tuned models · 2d351899
  Joaquin Torres authored May 14, 2024
  
  2d351899
13 May, 2024 12 commits
- delete old plots · de016bc9
  Joaquin Torres authored May 13, 2024
  
  de016bc9
- delete old plots · 6674b724
  Joaquin Torres authored May 13, 2024
  
  6674b724
- re run with cm · 129c9467
  Joaquin Torres authored May 13, 2024
  
  129c9467
- regenerated plots and modified code to include CM as well · 1e2a171d
  Joaquin Torres authored May 13, 2024
  
  1e2a171d
- Ran for all models · 6975fa04
  Joaquin Torres authored May 13, 2024
  
  6975fa04
- Regenerated plots · 1e976bc5
  Joaquin Torres authored May 13, 2024
  
  1e976bc5
- method names corrected for plots · 04e7acb1
  Joaquin Torres authored May 13, 2024
  
  04e7acb1
- testing script for DT and RF · e45e7474
  Joaquin Torres authored May 13, 2024
  
  e45e7474
- Renaming · ebe6d11f
  Joaquin Torres authored May 13, 2024
  
  ebe6d11f
- removed old files · 32fdf4c6
  Joaquin Torres authored May 13, 2024
  
  32fdf4c6
- checking results for DT · c04dcc50
  Joaquin Torres authored May 13, 2024
  
  c04dcc50
- testing the script with DT · 7847bcd0
  Joaquin Torres authored May 13, 2024
  
  7847bcd0
10 May, 2024 13 commits
- hyperparamers · 5ca4f7ae
  Joaquin Torres authored May 10, 2024
  
  5ca4f7ae
- completed model definition after tuning manually · cd7aff2a
  Joaquin Torres authored May 10, 2024
  
  cd7aff2a
- update hyperparamers for PRE · d57b78fe
  Joaquin Torres authored May 10, 2024
  
  d57b78fe
- tuning redone · 4ee1a0a1
  Joaquin Torres authored May 10, 2024
  
  4ee1a0a1
- ready to tune · d23c1f6f
  Joaquin Torres authored May 10, 2024
  
  d23c1f6f
- ready to retune · 05aa2417
  Joaquin Torres authored May 10, 2024
  
  05aa2417
- identified problem with svm: need probability=true for AUROC · d3a20982
  Joaquin Torres authored May 10, 2024
  
  d3a20982
- 2.2. completed model definition · 37c5050e
  Joaquin Torres authored May 10, 2024
  
  37c5050e
- retuned for post ORIG CS · 17c2236c
  Joaquin Torres authored May 10, 2024
  
  17c2236c
- Completed def of 2.1 and 2.4 as well, and identified typo in hyperparam script... · 60dc40b6
  Joaquin Torres authored May 10, 2024
```
Completed def of 2.1 and 2.4 as well, and identified typo in hyperparam script leading to incorrect results in 2.2 and 2.3
```
  60dc40b6
- style fix · af398543
  Joaquin Torres authored May 10, 2024
  
  af398543
- Completed description of tuned models for PRE from excel files · cbf63f20
  Joaquin Torres authored May 10, 2024
  
  cbf63f20
- post · a1b725f9
  Joaquin Torres authored May 10, 2024
  
  a1b725f9