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TFM_AdrianAyusoMuñoz
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Disnet
GNNs
TFM_AdrianAyusoMuñoz
Commits
c1efac0d
Commit
c1efac0d
authored
Jun 28, 2023
by
ADRIAN AYUSO MUNOZ
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parent
6d263e1a
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heterograph_construction.py
heterograph_construction.py
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heterograph_construction.py
View file @
c1efac0d
...
...
@@ -321,8 +321,7 @@ class DISNETConstructor:
# Add the edges to the graph.
for
edge_t
in
edges_dict
.
keys
():
for
edge
in
edges
[
edge_t
]:
# If a relation between a phenotype and a drug is in more than one type. The final type will be the last one.
for
edge
in
edges
[
edge_t
]:
# If a relation between a phenotype and a drug is in more than one type. The final type will be the last one.
try
:
G
.
add_edge
(
int
(
edge
[
0
]),
int
(
edge
[
1
]),
edge_feature
=
edge
[
2
],
edge_type
=
edge_t
)
except
IndexError
:
...
...
@@ -404,7 +403,7 @@ class DISNETConstructor:
"""
def
decodePredictions
(
self
,
list
,
type
,
n
=
50
,
prepared
=
False
,
name
=
''
):
dir
=
'results/'
+
type
+
'_'
+
str
(
n
)
+
name
+
'_'
+
'table.csv'
if
(
type
==
'dis_dru_the'
)
:
if
type
==
'dis_dru_the'
:
# Read the data
h
,
t
=
self
.
getNodeInfo
(
full
=
False
)
# Give each node its ID
...
...
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