Files and code update

data/complete/degs_T cell_total.csv

+names,scores,logfoldchanges,pvals,pvals_adj
+ENSG00000198846,4.811137,1.7838787,1.5007386566395886e-06,0.04234334119708599

data/complete/degs_pericyte_total.csv

+names,scores,logfoldchanges,pvals,pvals_adj
+ENSG00000106211,10.203879,1.8847187,1.905079425515209e-24,5.375181599091162e-20
+ENSG00000204389,8.499396,2.4507992,1.9057843538792078e-17,1.3442926386175463e-13
+ENSG00000169282,7.6771245,1.7665759,1.6269912319993884e-14,7.650926268477125e-11
+ENSG00000080824,7.3055577,1.1101086,2.7611934434650644e-13,1.1129581858195256e-09
+ENSG00000249307,6.3864245,2.4419992,1.6980927901100702e-10,4.791168807295563e-07
+ENSG00000188783,6.2328253,1.1246282,4.5809686471760224e-10,1.0993314842938347e-06
+ENSG00000109846,6.1314106,1.5257127,8.710331282157684e-10,1.7554428366148505e-06
+ENSG00000125868,6.012273,1.1278157,1.8294016520001416e-09,3.441104507412266e-06
+ENSG00000026025,5.7661204,1.1177812,8.111714376110418e-09,1.4304501320122217e-05
+ENSG00000109906,5.65449,0.97660965,1.5630948959328988e-08,2.5942777934556905e-05
+ENSG00000197956,5.471353,1.3109308,4.466131319079335e-08,7.000660842656857e-05
+ENSG00000120129,5.3028617,1.3002188,1.140014122026448e-07,0.00016082749226488114
+ENSG00000204388,5.279723,1.9751459,1.2937920573658479e-07,0.00017383020427894
+ENSG00000177469,5.132155,1.475945,2.864437535018991e-07,0.00035139176108939485
+ENSG00000164188,5.0788627,1.8963917,3.797007747927411e-07,0.0004463857233657163
+ENSG00000049323,5.0055094,1.0109398,5.571449857288402e-07,0.0006287938308935691
+ENSG00000087460,4.991479,0.93212223,5.991879271728181e-07,0.0006502341294300409
+ENSG00000088986,4.8236027,1.2955422,1.4098808553823604e-06,0.0014321528993238334
+ENSG00000154556,4.7952952,0.82707316,1.6243543107902054e-06,0.001580384719963643
+ENSG00000228696,4.7263727,1.7327657,2.285661449531549e-06,0.0021496645932844215
+ENSG00000096384,4.702742,0.86155623,2.5669080707434486e-06,0.0023363003618073037
+ENSG00000133687,4.6953573,0.8563625,2.661410584871509e-06,0.002346615614129676
+ENSG00000198727,4.66065,0.66950905,3.1521257464290597e-06,0.002695067513196846
+ENSG00000137766,4.630373,1.9908507,3.650074265484499e-06,0.00294248129716129
+ENSG00000166165,4.5538197,1.0452213,5.268051179078088e-06,0.003766304197864037
+ENSG00000172348,4.550989,0.9275901,5.339435332786159e-06,0.003766304197864037
+ENSG00000159335,4.518989,1.1981658,6.213558362011248e-06,0.004174179742479699
+ENSG00000177697,4.4986815,1.2395262,6.837618769445611e-06,0.004384623035906998
+ENSG00000187244,4.4403434,1.1792399,8.981542769837278e-06,0.005491340014446716
+ENSG00000198523,4.4371433,2.9352746,9.116054377757362e-06,0.005491340014446716
+ENSG00000172216,4.436405,1.105564,9.147367736274876e-06,0.005491340014446716
+ENSG00000150054,4.3984976,1.514614,1.0900286953493306e-05,0.0062211624300885105
+ENSG00000184347,4.397144,0.9965857,1.0968473774122214e-05,0.0062211624300885105
+ENSG00000065882,4.396036,0.81891215,1.1024565709885718e-05,0.0062211624300885105
+ENSG00000142279,4.3612056,1.5026994,1.2934784821474805e-05,0.0070970556189187016
+ENSG00000120694,4.353698,1.6761034,1.3386021284377312e-05,0.0070970556189187016
+ENSG00000137941,4.352713,0.8056885,1.3446301922327701e-05,0.0070970556189187016
+ENSG00000115457,4.3504977,1.6023544,1.358288156730852e-05,0.0070970556189187016
+ENSG00000035862,4.3319135,1.2674397,1.4781915547329778e-05,0.00746855873693095
+ENSG00000077943,4.331298,1.4129341,1.482329573872526e-05,0.00746855873693095
+ENSG00000118689,4.312098,0.8544231,1.617127040075925e-05,0.007893088224653035
+ENSG00000162599,4.285883,0.6353812,1.820149370055006e-05,0.008704324487474914
+ENSG00000119950,4.2803445,0.93443614,1.8660434560560504e-05,0.008775069352103577
+ENSG00000107186,4.2404675,0.89345884,2.230545580159591e-05,0.010317187466262763
+ENSG00000164684,4.2141294,1.3715477,2.5074354256207306e-05,0.011054264145920143
+ENSG00000185046,4.1964064,0.9782406,2.7118346891093846e-05,0.01159309329594262
+ENSG00000079691,4.1900063,1.2644056,2.7894655155413113e-05,0.011746980525522104
+ENSG00000153048,4.1727757,2.155557,3.0091106379423022e-05,0.012485596566109125
+ENSG00000110958,4.1628065,0.8664793,3.1435963398396926e-05,0.012854575467909699
+ENSG00000124788,4.1383142,0.712304,3.498666958075107e-05,0.014102126888869878
+ENSG00000187955,4.1324067,1.4476955,3.5898440231553435e-05,0.01421156062314216
+ENSG00000162998,4.1300683,1.2927861,3.626554544980455e-05,0.01421156062314216
+ENSG00000142798,4.124653,1.4249504,3.7129416901106386e-05,0.014350773943352284
+ENSG00000124440,4.1175146,1.8042517,3.829803704592784e-05,0.014602420476362891
+ENSG00000106034,4.08933,1.2340093,4.326208327231942e-05,0.016061048414848584
+ENSG00000122367,4.0578227,1.5193521,4.9532373604588394e-05,0.018150076899395604
+ENSG00000206190,4.020407,1.3684849,5.809757941462975e-05,0.021015682092099724
+ENSG00000156113,3.9869306,0.960263,6.693356973804249e-05,0.02390545152099834
+ENSG00000243927,3.9823768,1.7596824,6.822947604545502e-05,0.02406368333278142
+ENSG00000248079,3.9628077,2.2015052,7.407342999545918e-05,0.025802244781751617
+ENSG00000022267,3.9251463,1.1099092,8.667699643796073e-05,0.029824286030451976
+ENSG00000154380,3.916285,0.9760763,8.992395843480865e-05,0.030568728761905133
+ENSG00000101605,3.8772697,1.4294349,0.00010563520327554851,0.03386928705022274
+ENSG00000221869,3.8473623,0.70893383,0.00011939636024008529,0.03743075893526674
+ENSG00000106624,3.8311162,0.957455,0.00012756323615662705,0.03884523852069285
+ENSG00000131171,3.8300085,0.89910865,0.00012813882232022992,0.03884523852069285
+ENSG00000145687,3.8257008,0.63722783,0.00013040056419279987,0.03884523852069285
+ENSG00000182247,3.8249624,0.69574136,0.0001307920488912217,0.03884523852069285
+ENSG00000112137,3.8005934,0.8537658,0.00014435005028238797,0.04242538196580809
+ENSG00000198840,3.7976394,0.38057047,0.0001460805815010719,0.042491377392296324
+ENSG00000178568,3.7917318,1.1079869,0.00014960041364138994,0.04292680102551837
+ENSG00000130176,3.7892704,1.2630347,0.00015109044759217935,0.04292680102551837
+ENSG00000131374,3.787547,0.71140087,0.00015214177219747784,0.04292680102551837
+ENSG00000182809,3.772778,1.1283969,0.00016143987203558614,0.04390651825756212
+ENSG00000133112,3.7721627,0.80236536,0.00016183866378828498,0.04390651825756212
+ENSG00000067560,3.7688396,0.7855196,0.00016400820514150236,0.04407134769588085
+ENSG00000188846,3.7535782,1.1112844,0.00017432811747928283,0.04640252674224495
+ENSG00000104490,3.7442243,1.0537264,0.00018095187522841415,0.04746371041049145
+ENSG00000128245,3.7412705,1.3005087,0.00018309227274577964,0.04746371041049145
+ENSG00000120071,3.7346244,0.63409,0.0001879955043219125,0.04822084685857056
+ENSG00000124942,3.7251475,0.9890392,0.00019520098001814902,0.04917496117153638
+ENSG00000129116,3.720963,0.8585271,0.00019846451817885882,0.04955465823377435
+ENSG00000113721,-3.7256398,-0.37845042,0.00019482036710264823,0.04917496117153638
+ENSG00000105894,-3.7409012,-0.8014989,0.00018336148980129606,0.04746371041049145
+ENSG00000134871,-3.7789319,-0.30848077,0.00015750249070272117,0.04356796838409096
+ENSG00000132475,-3.7826242,-0.6542571,0.00015518362987848578,0.043351545713083924
+ENSG00000069431,-3.8284085,-0.85888416,0.00012897454724410907,0.03884523852069285
+ENSG00000109472,-3.8575776,-0.45331433,0.00011451633248898869,0.03630425079973951
+ENSG00000160584,-3.8879774,-0.36437201,0.00010108303010257368,0.03278227234878295
+ENSG00000151617,-3.8914235,-0.8975362,9.965779187695334e-05,0.03269586741637487
+ENSG00000128641,-3.909762,-0.70249516,9.238713923834912e-05,0.03066709568952965
+ENSG00000112541,-3.913085,-1.3015414,9.112445575653558e-05,0.030608053799650613
+ENSG00000196569,-4.101638,-0.71118826,4.1023623710545996e-05,0.015433087239907403
+ENSG00000141753,-4.205145,-0.84189236,2.6091505560120133e-05,0.011325720451981377
+ENSG00000171408,-4.2190523,-0.6632708,2.4533124053317637e-05,0.010987334843878685
+ENSG00000142089,-4.2288985,-0.6662339,2.348382465485281e-05,0.010687034074785034
+ENSG00000145623,-4.3113594,-1.1302327,1.6225380720534327e-05,0.007893088224653035
+ENSG00000179603,-4.511851,-0.92918116,6.426441486826547e-06,0.00421679178025142
+ENSG00000158270,-4.529697,-0.9411411,5.906840214317736e-06,0.004064914552365242
+ENSG00000230876,-4.575235,-0.7303821,4.756858245286252e-06,0.003531967247125042
+ENSG00000079215,-4.5838504,-0.80862254,4.56491123630456e-06,0.0034810532576306256
+ENSG00000188313,-4.604404,-1.5170913,4.136487309516697e-06,0.003241971928833711
+ENSG00000073417,-4.6407113,-0.6338663,3.4721159230980276e-06,0.002881345610888554
+ENSG00000099622,-4.822003,-1.4958272,1.421239807941426e-06,0.0014321528993238334
+ENSG00000116016,-5.228154,-0.75209385,1.712106516774166e-07,0.00021957766077628678
+ENSG00000183570,-5.3710456,-0.9864346,7.82813565233756e-08,0.00011624781443721277
+ENSG00000183826,-6.1469183,-0.80622196,7.900287597958676e-10,1.714666265972339e-06
+ENSG00000062716,-6.229625,-1.1125556,4.675519337772821e-10,1.0993314842938347e-06
+ENSG00000171862,-6.821376,-0.7821016,9.017273639072149e-12,2.8269152858491187e-08
+ENSG00000118473,-6.9567595,-0.6023907,3.481883869715881e-12,1.2280169173004197e-08
+ENSG00000103196,-7.81657,-1.6378525,5.428214743150694e-15,3.0631415795599365e-11
+ENSG00000163638,-8.76278,-1.6780226,1.9049343316019406e-18,1.7915907388716253e-14
+ENSG00000154217,-9.620129,-1.588356,6.574882752792545e-22,9.275515843502083e-18

data/complete/graphs/T cell_network.graphml

+<?xml version='1.0' encoding='utf-8'?>
+<graphml xmlns="http://graphml.graphdrawing.org/xmlns" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://graphml.graphdrawing.org/xmlns http://graphml.graphdrawing.org/xmlns/1.0/graphml.xsd">
+  <graph edgedefault="undirected" />
+</graphml>