Commit e663b378 authored by Andrea Alvarez Perez's avatar Andrea Alvarez Perez

Update README.md

parent 43750667
# DATA OBTENTION
# CODE AND ANALYSIS
## Code
## Repository content
| Script name | Usage |
|------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|-------------------------------------------------------------------------------------------------|
| [scrna_ppi_analysis.ipynb](https://medal.ctb.upm.es/internal/gitlab/disnet/network-medicine/network-medicine-and-single-cell-for-alzheimer/new/master/code/scrna_ppi_analysis.ipynb) | Jupyter notebook used to load the h5ad data, perform the data preprocessing, the differential expression analysis and the construction of the cell-type-specific PPI subnetworks overlapping the Alzheimer's disease main disease module. In addition, subsequent analysis and plots generation were computed.|
## Functions folder
### Functions folder
| Script name | Used in: | Usage |
|------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|-------------|
......
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