<p>Ontology elements (classes, object properties and datatype properties) are created isolated, with no relation to the rest of the ontology. </p><p>This pitfall affects to the following ontology elements: </p><ul><li><ahref=""http://bio2rdf.org/ctd_vocabulary:Chemical-Disease-Association"^^xsd:anyURI"target="_blank">"http://bio2rdf.org/ctd_vocabulary:Chemical-Disease-Association"^^xsd:anyURI</a></li><li><ahref=""http://rdf.ebi.ac.uk/terms/chembl#Mechanism"^^xsd:anyURI"target="_blank">"http://rdf.ebi.ac.uk/terms/chembl#Mechanism"^^xsd:anyURI</a></li><li><ahref=""http://purl.bioontology.org/ontology/SNOMEDCT/62014003"^^xsd:anyURI"target="_blank">"http://purl.bioontology.org/ontology/SNOMEDCT/62014003"^^xsd:anyURI</a></li><li><ahref=""http://rdf.ebi.ac.uk/terms/chembl#DrugIndication"^^xsd:anyURI"target="_blank">"http://rdf.ebi.ac.uk/terms/chembl#DrugIndication"^^xsd:anyURI</a></li></ul></div>
<p>Ontology elements (classes, object properties and datatype properties) are created isolated, with no relation to the rest of the ontology. </p><p>This pitfall affects to the following ontology elements: </p><ul><li><ahref=""http://www.orpha.net/ORDO/Orphanet_C009"^^xsd:anyURI"target="_blank">"http://www.orpha.net/ORDO/Orphanet_C009"^^xsd:anyURI</a></li><li><ahref=""http://bio2rdf.org/ctd_vocabulary:Chemical-Disease-Association"^^xsd:anyURI"target="_blank">"http://bio2rdf.org/ctd_vocabulary:Chemical-Disease-Association"^^xsd:anyURI</a></li><li><ahref=""http://rdf.ebi.ac.uk/terms/chembl#DrugIndication"^^xsd:anyURI"target="_blank">"http://rdf.ebi.ac.uk/terms/chembl#DrugIndication"^^xsd:anyURI</a></li><li><ahref=""http://rdf.ebi.ac.uk/terms/chembl#Mechanism"^^xsd:anyURI"target="_blank">"http://rdf.ebi.ac.uk/terms/chembl#Mechanism"^^xsd:anyURI</a></li><li><ahref=""http://purl.bioontology.org/ontology/SNOMEDCT/62014003"^^xsd:anyURI"target="_blank">"http://purl.bioontology.org/ontology/SNOMEDCT/62014003"^^xsd:anyURI</a></li></ul></div>
<p>This pitfall consists in creating an ontology element and failing to provide human readable annotations attached to it. Consequently, ontology elements lack annotation properties that label them (e.g. rdfs:label, lemon:LexicalEntry, skos:prefLabel or skos:altLabel) or that define them (e.g. rdfs:comment or dc:description). This pitfall is related to the guidelines provided in [5]. </p><p>This pitfall affects to the following ontology elements: </p><ul><li><ahref=""http://www.drugtargetontology.org/dto/DTO_05007542"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_05007542"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_05007575"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_05007575"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_05007613"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_05007613"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_05007378"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_05007378"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_05007527"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_05007527"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_05007584"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_05007584"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_01300327"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_01300327"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_05007624"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_05007624"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_05007612"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_05007612"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_05007616"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_05007616"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_05007621"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_05007621"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_05007405"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_05007405"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_05007620"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_05007620"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_05007599"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_05007599"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_03300101"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_03300101"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_05007697"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_05007697"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_05007608"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_05007608"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_02300001"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_02300001"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_05007530"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_05007530"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_00102000"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_00102000"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_05007557"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_05007557"^^xsd:anyURI</a></li></ul></div>
<p>This pitfall consists in creating an ontology element and failing to provide human readable annotations attached to it. Consequently, ontology elements lack annotation properties that label them (e.g. rdfs:label, lemon:LexicalEntry, skos:prefLabel or skos:altLabel) or that define them (e.g. rdfs:comment or dc:description). This pitfall is related to the guidelines provided in [5]. </p><p>This pitfall affects to the following ontology elements: </p><ul><li><ahref=""http://www.drugtargetontology.org/dto/DTO_05007575"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_05007575"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_05007613"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_05007613"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_03300101"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_03300101"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_05007697"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_05007697"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_00102000"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_00102000"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_05007527"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_05007527"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_05007557"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_05007557"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_05007378"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_05007378"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_02300001"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_02300001"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_05007542"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_05007542"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_05007599"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_05007599"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_05007616"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_05007616"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_05007612"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_05007612"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_05007405"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_05007405"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_05007584"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_05007584"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_05007620"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_05007620"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_01300327"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_01300327"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_05007530"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_05007530"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_05007621"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_05007621"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_05007624"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_05007624"^^xsd:anyURI</a></li><li><ahref=""http://www.drugtargetontology.org/dto/DTO_05007608"^^xsd:anyURI"target="_blank">"http://www.drugtargetontology.org/dto/DTO_05007608"^^xsd:anyURI</a></li></ul></div>
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@@ -91,7 +91,7 @@ P11. Missing domain or range in properties<span style="float: right;">9 cases de
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@@ -91,7 +91,7 @@ P11. Missing domain or range in properties<span style="float: right;">9 cases de
<p>Object and/or datatype properties without domain or range (or none of them) are included in the ontology. </p><p>This pitfall affects to the following ontology elements: </p><ul><li><ahref=""http://purl.bioontology.org/ontology/SNOMEDCT/has_causative_agent"^^xsd:anyURI"target="_blank">"http://purl.bioontology.org/ontology/SNOMEDCT/has_causative_agent"^^xsd:anyURI</a></li><li><ahref=""http://purl.bioontology.org/ontology/SNOMEDCT/cause_of"^^xsd:anyURI"target="_blank">"http://purl.bioontology.org/ontology/SNOMEDCT/cause_of"^^xsd:anyURI</a></li><li><ahref=""http://rdf.ebi.ac.uk/terms/chembl#hasMechanism"^^xsd:anyURI"target="_blank">"http://rdf.ebi.ac.uk/terms/chembl#hasMechanism"^^xsd:anyURI</a></li><li><ahref=""http://rdf.ebi.ac.uk/terms/chembl#hasMolecule"^^xsd:anyURI"target="_blank">"http://rdf.ebi.ac.uk/terms/chembl#hasMolecule"^^xsd:anyURI</a></li><li><ahref=""http://rdf.ebi.ac.uk/terms/chembl#isTargetForMechanism"^^xsd:anyURI"target="_blank">"http://rdf.ebi.ac.uk/terms/chembl#isTargetForMechanism"^^xsd:anyURI</a></li><li><ahref=""http://purl.bioontology.org/ontology/SNOMEDCT/due_to"^^xsd:anyURI"target="_blank">"http://purl.bioontology.org/ontology/SNOMEDCT/due_to"^^xsd:anyURI</a></li><li><ahref=""http://rdf.ebi.ac.uk/terms/chembl#hasDrugIndication"^^xsd:anyURI"target="_blank">"http://rdf.ebi.ac.uk/terms/chembl#hasDrugIndication"^^xsd:anyURI</a></li><li><ahref=""http://purl.bioontology.org/ontology/SNOMEDCT/causative_agent_of"^^xsd:anyURI"target="_blank">"http://purl.bioontology.org/ontology/SNOMEDCT/causative_agent_of"^^xsd:anyURI</a></li><li><ahref=""http://rdf.ebi.ac.uk/terms/chembl#hasTarget"^^xsd:anyURI"target="_blank">"http://rdf.ebi.ac.uk/terms/chembl#hasTarget"^^xsd:anyURI</a></li></ul></div>
<p>Object and/or datatype properties without domain or range (or none of them) are included in the ontology. </p><p>This pitfall affects to the following ontology elements: </p><ul><li><ahref=""http://purl.bioontology.org/ontology/SNOMEDCT/has_causative_agent"^^xsd:anyURI"target="_blank">"http://purl.bioontology.org/ontology/SNOMEDCT/has_causative_agent"^^xsd:anyURI</a></li><li><ahref=""http://purl.bioontology.org/ontology/SNOMEDCT/causative_agent_of"^^xsd:anyURI"target="_blank">"http://purl.bioontology.org/ontology/SNOMEDCT/causative_agent_of"^^xsd:anyURI</a></li><li><ahref=""http://purl.bioontology.org/ontology/SNOMEDCT/cause_of"^^xsd:anyURI"target="_blank">"http://purl.bioontology.org/ontology/SNOMEDCT/cause_of"^^xsd:anyURI</a></li><li><ahref=""http://rdf.ebi.ac.uk/terms/chembl#hasMolecule"^^xsd:anyURI"target="_blank">"http://rdf.ebi.ac.uk/terms/chembl#hasMolecule"^^xsd:anyURI</a></li><li><ahref=""http://purl.bioontology.org/ontology/SNOMEDCT/due_to"^^xsd:anyURI"target="_blank">"http://purl.bioontology.org/ontology/SNOMEDCT/due_to"^^xsd:anyURI</a></li><li><ahref=""http://rdf.ebi.ac.uk/terms/chembl#hasTarget"^^xsd:anyURI"target="_blank">"http://rdf.ebi.ac.uk/terms/chembl#hasTarget"^^xsd:anyURI</a></li><li><ahref=""http://rdf.ebi.ac.uk/terms/chembl#isTargetForMechanism"^^xsd:anyURI"target="_blank">"http://rdf.ebi.ac.uk/terms/chembl#isTargetForMechanism"^^xsd:anyURI</a></li><li><ahref=""http://rdf.ebi.ac.uk/terms/chembl#hasDrugIndication"^^xsd:anyURI"target="_blank">"http://rdf.ebi.ac.uk/terms/chembl#hasDrugIndication"^^xsd:anyURI</a></li><li><ahref=""http://rdf.ebi.ac.uk/terms/chembl#hasMechanism"^^xsd:anyURI"target="_blank">"http://rdf.ebi.ac.uk/terms/chembl#hasMechanism"^^xsd:anyURI</a></li></ul></div>
"@value" : "has target is a relation between a process and an entity, where the entity is present at the beginning of the process and undergoes a change or transformation in the process."
"@value" : "has target is a relation between a process and an entity, where the entity is present at the beginning of the process and undergoes a change or transformation in the process."
<http://semanticscience.org/resource/SIO_000212> <http://purl.org/dc/terms/description> "A is referred to by B iff B is an informational entity that makes reference to A."@en .
<http://semanticscience.org/resource/SIO_000212> <http://purl.org/dc/terms/description> "A is referred to by B iff B is an informational entity that makes reference to A."@en .
<http://semanticscience.org/resource/SIO_000215> <http://purl.org/dc/terms/description> "is measurement value of is a relation between a value and the entity that it is a measurement of."@en .
<http://semanticscience.org/resource/SIO_000215> <http://purl.org/dc/terms/description> "is measurement value of is a relation between a value and the entity that it is a measurement of."@en .
<http://semanticscience.org/resource/SIO_000216> <http://purl.org/dc/terms/description> "has measurement value is a relation between a quality/realizable and a measurement value."@en .
<http://semanticscience.org/resource/SIO_000216> <http://purl.org/dc/terms/description> "has measurement value is a relation between a quality/realizable and a measurement value."@en .
<http://semanticscience.org/resource/SIO_000291> <http://purl.org/dc/terms/description> "has target is a relation between a process and an entity, where the entity is present at the beginning of the process and undergoes a change or transformation in the process."@en .
<http://semanticscience.org/resource/SIO_000291> <http://purl.org/dc/terms/description> "has target is a relation between a process and an entity, where the entity is present at the beginning of the process and undergoes a change or transformation in the process."@en .
<http://semanticscience.org/resource/SIO_000292> <http://purl.org/dc/terms/description> "is target in is a relation between an entity and a process, where the entity is present at the beginning of the process and undergoes a change or transformation in the process."@en .
<http://semanticscience.org/resource/SIO_000292> <http://purl.org/dc/terms/description> "is target in is a relation between an entity and a process, where the entity is present at the beginning of the process and undergoes a change or transformation in the process."@en .
<http://semanticscience.org/resource/SIO_000628> <http://purl.org/dc/terms/description> "refers to is a relation between one entity and the entity that it makes reference to."@en .
<http://semanticscience.org/resource/SIO_000628> <http://purl.org/dc/terms/description> "refers to is a relation between one entity and the entity that it makes reference to."@en .
<http://rdf.ebi.ac.uk/terms/chembl#highestDevelopmentPhase> <http://purl.org/dc/elements/1.1/description> "The highest phase the molecule has reached in drug approval process (4 = approved)" .
<http://rdf.ebi.ac.uk/terms/chembl#highestDevelopmentPhase> <http://purl.org/dc/elements/1.1/description> "The highest phase the molecule has reached in drug approval process (4 = approved)" .
<http://rdf.ebi.ac.uk/terms/chembl#highestDevelopmentPhase> <http://www.w3.org/2000/01/rdf-schema#label> "ChEMBL Molecule Development Phase" .
<http://rdf.ebi.ac.uk/terms/chembl#highestDevelopmentPhase> <http://www.w3.org/2000/01/rdf-schema#label> "ChEMBL Molecule Development Phase" .
<http://semanticscience.org/resource/SIO_000300> <http://purl.org/dc/terms/description> "A relation between a informational entity and its actual value (numeric, date, text, etc)."@en .
<http://semanticscience.org/resource/SIO_000300> <http://purl.org/dc/terms/description> "A relation between a informational entity and its actual value (numeric, date, text, etc)."@en .
_:genid135 <http://www.w3.org/2002/07/owl#annotatedTarget> "A sequence_variant is a non exact copy of a sequence_feature or genome exhibiting one or more sequence_alteration." .
_:genid137 <http://www.w3.org/2002/07/owl#annotatedTarget> "A sequence_variant is a non exact copy of a sequence_feature or genome exhibiting one or more sequence_alteration." .