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Eladais
CDM-OMOP
Commits
8fc87ae7
Commit
8fc87ae7
authored
May 26, 2023
by
Pepe Márquez Romero
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scripts sql para instancia de omop en PostgreSQL y MySQL
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instancia_omop_mysql/README.md
instancia_omop_mysql/README.md
+11
-0
instancia_omop_mysql/drop_tables.sql
instancia_omop_mysql/drop_tables.sql
+40
-261
instancia_omop_mysql/omop_cdm_constraints.sql
instancia_omop_mysql/omop_cdm_constraints.sql
+358
-179
instancia_omop_mysql/omop_cdm_indices.sql
instancia_omop_mysql/omop_cdm_indices.sql
+0
-96
instancia_omop_mysql/omop_cdm_primary_keys.sql
instancia_omop_mysql/omop_cdm_primary_keys.sql
+59
-30
instancia_omop_mysql/omop_tables.sql
instancia_omop_mysql/omop_tables.sql
+159
-120
instancia_omop_postgresql/Makefile
instancia_omop_postgresql/Makefile
+2
-0
instancia_omop_postgresql/README.md
instancia_omop_postgresql/README.md
+13
-0
instancia_omop_postgresql/omop_constraints_postgres.sql
instancia_omop_postgresql/omop_constraints_postgres.sql
+1
-1
instancia_omop_postgresql/omop_pk_postgres.sql
instancia_omop_postgresql/omop_pk_postgres.sql
+1
-0
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instancia_omop_mysql/README.md
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`mysql -u omop_root -h IP -pPASS -P PORT omop -e "source $(pwd)/omop_tables.sql"`
`mysql -u omop_root -h IP -pPASS -P PORT omop -e "source $(pwd)/omop_cdm_primary_keys.sql"`
`mysql -u omop_root -h IP -pPASS -P PORT omop -e "source $(pwd)/omop_cdm_constraints.sql"`
No hace falta crear indexes porque MySQL crea indexes cuando se crea una primary key y una foreign key.
`mysql -u omop_root -h IP -pPASS -P PORT omop -e "source $(pwd)/drop_tables.sql"`
instancia_omop_mysql/drop_tables.sql
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8fc87ae7
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instancia_omop_mysql/omop_cdm_constraints.sql
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8fc87ae7
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instancia_omop_mysql/omop_cdm_indices.sql
deleted
100644 → 0
View file @
7d631397
/*sql server OMOP CDM Indices
There are no unique indices created because it is assumed that the primary key constraints have been run prior to
implementing indices
*/
/************************
Standardized clinical data
************************/
CREATE
INDEX
idx_person_id
ON
PERSON
(
person_id
ASC
);
CREATE
INDEX
idx_gender
ON
PERSON
(
gender_concept_id
ASC
);
CREATE
INDEX
idx_observation_period_id_1
ON
OBSERVATION_PERIOD
(
person_id
ASC
);
CREATE
INDEX
idx_visit_person_id_1
ON
VISIT_OCCURRENCE
(
person_id
ASC
);
CREATE
INDEX
idx_visit_concept_id_1
ON
VISIT_OCCURRENCE
(
visit_concept_id
ASC
);
CREATE
INDEX
idx_visit_det_person_id_1
ON
VISIT_DETAIL
(
person_id
ASC
);
CREATE
INDEX
idx_visit_det_concept_id_1
ON
VISIT_DETAIL
(
visit_detail_concept_id
ASC
);
CREATE
INDEX
idx_condition_person_id_1
ON
CONDITION_OCCURRENCE
(
person_id
ASC
);
CREATE
INDEX
idx_condition_concept_id_1
ON
CONDITION_OCCURRENCE
(
condition_concept_id
ASC
);
CREATE
INDEX
idx_condition_visit_id_1
ON
CONDITION_OCCURRENCE
(
visit_occurrence_id
ASC
);
CREATE
INDEX
idx_drug_person_id_1
ON
DRUG_EXPOSURE
(
person_id
ASC
);
CREATE
INDEX
idx_drug_concept_id_1
ON
DRUG_EXPOSURE
(
drug_concept_id
ASC
);
CREATE
INDEX
idx_drug_visit_id_1
ON
DRUG_EXPOSURE
(
visit_occurrence_id
ASC
);
CREATE
INDEX
idx_procedure_person_id_1
ON
PROCEDURE_OCCURRENCE
(
person_id
ASC
);
CREATE
INDEX
idx_procedure_concept_id_1
ON
PROCEDURE_OCCURRENCE
(
procedure_concept_id
ASC
);
CREATE
INDEX
idx_procedure_visit_id_1
ON
PROCEDURE_OCCURRENCE
(
visit_occurrence_id
ASC
);
CREATE
INDEX
idx_device_person_id_1
ON
DEVICE_EXPOSURE
(
person_id
ASC
);
CREATE
INDEX
idx_device_concept_id_1
ON
DEVICE_EXPOSURE
(
device_concept_id
ASC
);
CREATE
INDEX
idx_device_visit_id_1
ON
DEVICE_EXPOSURE
(
visit_occurrence_id
ASC
);
CREATE
INDEX
idx_measurement_person_id_1
ON
MEASUREMENT
(
person_id
ASC
);
CREATE
INDEX
idx_measurement_concept_id_1
ON
MEASUREMENT
(
measurement_concept_id
ASC
);
CREATE
INDEX
idx_measurement_visit_id_1
ON
MEASUREMENT
(
visit_occurrence_id
ASC
);
CREATE
INDEX
idx_observation_person_id_1
ON
OBSERVATION
(
person_id
ASC
);
CREATE
INDEX
idx_observation_concept_id_1
ON
OBSERVATION
(
observation_concept_id
ASC
);
CREATE
INDEX
idx_observation_visit_id_1
ON
OBSERVATION
(
visit_occurrence_id
ASC
);
CREATE
INDEX
idx_death_person_id_1
ON
DEATH
(
person_id
ASC
);
CREATE
INDEX
idx_note_person_id_1
ON
NOTE
(
person_id
ASC
);
CREATE
INDEX
idx_note_concept_id_1
ON
NOTE
(
note_type_concept_id
ASC
);
CREATE
INDEX
idx_note_visit_id_1
ON
NOTE
(
visit_occurrence_id
ASC
);
CREATE
INDEX
idx_note_nlp_note_id_1
ON
NOTE_NLP
(
note_id
ASC
);
CREATE
INDEX
idx_note_nlp_concept_id_1
ON
NOTE_NLP
(
note_nlp_concept_id
ASC
);
CREATE
INDEX
idx_specimen_person_id_1
ON
SPECIMEN
(
person_id
ASC
);
CREATE
INDEX
idx_specimen_concept_id_1
ON
SPECIMEN
(
specimen_concept_id
ASC
);
CREATE
INDEX
idx_fact_relationship_id1
ON
FACT_RELATIONSHIP
(
domain_concept_id_1
ASC
);
CREATE
INDEX
idx_fact_relationship_id2
ON
FACT_RELATIONSHIP
(
domain_concept_id_2
ASC
);
CREATE
INDEX
idx_fact_relationship_id3
ON
FACT_RELATIONSHIP
(
relationship_concept_id
ASC
);
/************************
Standardized health system data
************************/
CREATE
INDEX
idx_location_id_1
ON
LOCATION
(
location_id
ASC
);
CREATE
INDEX
idx_care_site_id_1
ON
CARE_SITE
(
care_site_id
ASC
);
CREATE
INDEX
idx_provider_id_1
ON
PROVIDER
(
provider_id
ASC
);
/************************
Standardized health economics
************************/
CREATE
INDEX
idx_period_person_id_1
ON
PAYER_PLAN_PERIOD
(
person_id
ASC
);
CREATE
INDEX
idx_cost_event_id
ON
COST
(
cost_event_id
ASC
);
/************************
Standardized derived elements
************************/
CREATE
INDEX
idx_drug_era_person_id_1
ON
DRUG_ERA
(
person_id
ASC
);
CREATE
INDEX
idx_drug_era_concept_id_1
ON
DRUG_ERA
(
drug_concept_id
ASC
);
CREATE
INDEX
idx_dose_era_person_id_1
ON
DOSE_ERA
(
person_id
ASC
);
CREATE
INDEX
idx_dose_era_concept_id_1
ON
DOSE_ERA
(
drug_concept_id
ASC
);
CREATE
INDEX
idx_condition_era_person_id_1
ON
CONDITION_ERA
(
person_id
ASC
);
CREATE
INDEX
idx_condition_era_concept_id_1
ON
CONDITION_ERA
(
condition_concept_id
ASC
);
/**************************
Standardized meta-data
***************************/
CREATE
INDEX
idx_metadata_concept_id_1
ON
METADATA
(
metadata_concept_id
ASC
);
/**************************
Standardized vocabularies
***************************/
CREATE
INDEX
idx_concept_concept_id
ON
CONCEPT
(
concept_id
ASC
);
CREATE
INDEX
idx_concept_code
ON
CONCEPT
(
concept_code
ASC
);
CREATE
INDEX
idx_concept_vocabluary_id
ON
CONCEPT
(
vocabulary_id
ASC
);
CREATE
INDEX
idx_concept_domain_id
ON
CONCEPT
(
domain_id
ASC
);
CREATE
INDEX
idx_vocabulary_vocabulary_id
ON
VOCABULARY
(
vocabulary_id
ASC
);
CREATE
INDEX
idx_domain_domain_id
ON
DOMAIN
(
domain_id
ASC
);
CREATE
INDEX
idx_concept_class_class_id
ON
CONCEPT_CLASS
(
concept_class_id
ASC
);
CREATE
INDEX
idx_concept_relationship_id_1
ON
CONCEPT_RELATIONSHIP
(
concept_id_1
ASC
);
CREATE
INDEX
idx_concept_relationship_id_2
ON
CONCEPT_RELATIONSHIP
(
concept_id_2
ASC
);
CREATE
INDEX
idx_concept_relationship_id_3
ON
CONCEPT_RELATIONSHIP
(
relationship_id
ASC
);
CREATE
INDEX
idx_relationship_rel_id
ON
RELATIONSHIP
(
relationship_id
ASC
);
CREATE
INDEX
idx_concept_synonym_id
ON
CONCEPT_SYNONYM
(
concept_id
ASC
);
CREATE
INDEX
idx_concept_ancestor_id_1
ON
CONCEPT_ANCESTOR
(
ancestor_concept_id
ASC
);
CREATE
INDEX
idx_concept_ancestor_id_2
ON
CONCEPT_ANCESTOR
(
descendant_concept_id
ASC
);
CREATE
INDEX
idx_source_to_concept_map_3
ON
SOURCE_TO_CONCEPT_MAP
(
target_concept_id
ASC
);
CREATE
INDEX
idx_source_to_concept_map_1
ON
SOURCE_TO_CONCEPT_MAP
(
source_vocabulary_id
ASC
);
CREATE
INDEX
idx_source_to_concept_map_2
ON
SOURCE_TO_CONCEPT_MAP
(
target_vocabulary_id
ASC
);
CREATE
INDEX
idx_source_to_concept_map_c
ON
SOURCE_TO_CONCEPT_MAP
(
source_code
ASC
);
CREATE
INDEX
idx_drug_strength_id_1
ON
DRUG_STRENGTH
(
drug_concept_id
ASC
);
CREATE
INDEX
idx_drug_strength_id_2
ON
DRUG_STRENGTH
(
ingredient_concept_id
ASC
);
--Additional v60 indices
--CREATE CLUSTERED INDEX idx_survey_person_id_1 ON SURVEY_CONDUCT (person_id ASC);
--CREATE CLUSTERED INDEX idx_episode_person_id_1 ON EPISODE (person_id ASC);
--CREATE INDEX idx_episode_concept_id_1 ON EPISODE (episode_concept_id ASC);
--CREATE CLUSTERED INDEX idx_episode_event_id_1 ON EPISODE_EVENT (episode_id ASC);
--CREATE INDEX idx_ee_field_concept_id_1 ON EPISODE_EVENT (event_field_concept_id ASC);
instancia_omop_mysql/omop_cdm_primary_keys.sql
View file @
8fc87ae7
--sql server CDM Primary Key Constraints for OMOP Common Data Model 5.4
-- mysql CDM Primary Key Constraints for OMOP Common Data Model 5.4
ALTER
TABLE
PERSON
ADD
CONSTRAINT
xpk_PERSON
PRIMARY
KEY
(
person_id
);
ALTER
TABLE
OBSERVATION_PERIOD
ADD
CONSTRAINT
xpk_OBSERVATION_PERIOD
PRIMARY
KEY
(
observation_period_id
);
ALTER
TABLE
omop
.
PERSON
ADD
CONSTRAINT
xpk_PERSON
PRIMARY
KEY
(
person_id
);
ALTER
TABLE
VISIT_OCCURRENCE
ADD
CONSTRAINT
xpk_VISIT_OCCURRENCE
PRIMARY
KEY
(
visit_occurrence_id
);
ALTER
TABLE
VISIT_DETAIL
ADD
CONSTRAINT
xpk_VISIT_DETAIL
PRIMARY
KEY
(
visit_detail_id
);
ALTER
TABLE
omop
.
OBSERVATION_PERIOD
ADD
CONSTRAINT
xpk_OBSERVATION_PERIOD
PRIMARY
KEY
(
observation_period_id
);
ALTER
TABLE
CONDITION_OCCURRENCE
ADD
CONSTRAINT
xpk_CONDITION_OCCURRENCE
PRIMARY
KEY
(
condition_occurrence_id
);
ALTER
TABLE
DRUG_EXPOSURE
ADD
CONSTRAINT
xpk_DRUG_EXPOSURE
PRIMARY
KEY
(
drug_exposure_id
);
ALTER
TABLE
omop
.
VISIT_OCCURRENCE
ADD
CONSTRAINT
xpk_VISIT_OCCURRENCE
PRIMARY
KEY
(
visit_occurrence_id
);
ALTER
TABLE
PROCEDURE_OCCURRENCE
ADD
CONSTRAINT
xpk_PROCEDURE_OCCURRENCE
PRIMARY
KEY
(
procedure_occurrence_id
);
ALTER
TABLE
DEVICE_EXPOSURE
ADD
CONSTRAINT
xpk_DEVICE_EXPOSURE
PRIMARY
KEY
(
device_exposure_id
);
ALTER
TABLE
omop
.
VISIT_DETAIL
ADD
CONSTRAINT
xpk_VISIT_DETAIL
PRIMARY
KEY
(
visit_detail_id
);
ALTER
TABLE
MEASUREMENT
ADD
CONSTRAINT
xpk_MEASUREMENT
PRIMARY
KEY
(
measurement_id
);
ALTER
TABLE
OBSERVATION
ADD
CONSTRAINT
xpk_OBSERVATION
PRIMARY
KEY
(
observation_id
);
ALTER
TABLE
omop
.
CONDITION_OCCURRENCE
ADD
CONSTRAINT
xpk_CONDITION_OCCURRENCE
PRIMARY
KEY
(
condition_occurrence_id
);
ALTER
TABLE
NOTE
ADD
CONSTRAINT
xpk_NOTE
PRIMARY
KEY
(
note_id
);
ALTER
TABLE
NOTE_NLP
ADD
CONSTRAINT
xpk_NOTE_NLP
PRIMARY
KEY
(
note_nlp_id
);
ALTER
TABLE
omop
.
DRUG_EXPOSURE
ADD
CONSTRAINT
xpk_DRUG_EXPOSURE
PRIMARY
KEY
(
drug_exposure_id
);
ALTER
TABLE
SPECIMEN
ADD
CONSTRAINT
xpk_SPECIMEN
PRIMARY
KEY
(
specimen_id
);
ALTER
TABLE
LOCATION
ADD
CONSTRAINT
xpk_LOCATION
PRIMARY
KEY
(
location_id
);
ALTER
TABLE
omop
.
PROCEDURE_OCCURRENCE
ADD
CONSTRAINT
xpk_PROCEDURE_OCCURRENCE
PRIMARY
KEY
(
procedure_occurrence_id
);
ALTER
TABLE
CARE_SITE
ADD
CONSTRAINT
xpk_CARE_SITE
PRIMARY
KEY
(
care_site_id
);
ALTER
TABLE
PROVIDER
ADD
CONSTRAINT
xpk_PROVIDER
PRIMARY
KEY
(
provider_id
);
ALTER
TABLE
omop
.
DEVICE_EXPOSURE
ADD
CONSTRAINT
xpk_DEVICE_EXPOSURE
PRIMARY
KEY
(
device_exposure_id
);
ALTER
TABLE
PAYER_PLAN_PERIOD
ADD
CONSTRAINT
xpk_PAYER_PLAN_PERIOD
PRIMARY
KEY
(
payer_plan_period_id
);
ALTER
TABLE
COST
ADD
CONSTRAINT
xpk_COST
PRIMARY
KEY
(
cost_id
);
ALTER
TABLE
omop
.
MEASUREMENT
ADD
CONSTRAINT
xpk_MEASUREMENT
PRIMARY
KEY
(
measurement_id
);
ALTER
TABLE
DRUG_ERA
ADD
CONSTRAINT
xpk_DRUG_ERA
PRIMARY
KEY
(
drug_era_id
);
ALTER
TABLE
DOSE_ERA
ADD
CONSTRAINT
xpk_DOSE_ERA
PRIMARY
KEY
(
dose_era_id
);
ALTER
TABLE
omop
.
OBSERVATION
ADD
CONSTRAINT
xpk_OBSERVATION
PRIMARY
KEY
(
observation_id
);
ALTER
TABLE
CONDITION_ERA
ADD
CONSTRAINT
xpk_CONDITION_ERA
PRIMARY
KEY
(
condition_era_id
);
ALTER
TABLE
EPISODE
ADD
CONSTRAINT
xpk_EPISODE
PRIMARY
KEY
(
episode_id
);
ALTER
TABLE
omop
.
NOTE
ADD
CONSTRAINT
xpk_NOTE
PRIMARY
KEY
(
note_id
);
ALTER
TABLE
METADATA
ADD
CONSTRAINT
xpk_METADATA
PRIMARY
KEY
(
metadata_id
);
ALTER
TABLE
CONCEPT
ADD
CONSTRAINT
xpk_CONCEPT
PRIMARY
KEY
(
concept_id
);
ALTER
TABLE
omop
.
NOTE_NLP
ADD
CONSTRAINT
xpk_NOTE_NLP
PRIMARY
KEY
(
note_nlp_id
);
ALTER
TABLE
VOCABULARY
ADD
CONSTRAINT
xpk_VOCABULARY
PRIMARY
KEY
(
vocabulary_id
);
ALTER
TABLE
DOMAIN
ADD
CONSTRAINT
xpk_DOMAIN
PRIMARY
KEY
(
domain_id
);
ALTER
TABLE
omop
.
SPECIMEN
ADD
CONSTRAINT
xpk_SPECIMEN
PRIMARY
KEY
(
specimen_id
);
ALTER
TABLE
CONCEPT_CLASS
ADD
CONSTRAINT
xpk_CONCEPT_CLASS
PRIMARY
KEY
(
concept_class_id
);
ALTER
TABLE
RELATIONSHIP
ADD
CONSTRAINT
xpk_RELATIONSHIP
PRIMARY
KEY
(
relationship_id
);
ALTER
TABLE
omop
.
LOCATION
ADD
CONSTRAINT
xpk_LOCATION
PRIMARY
KEY
(
location_id
);
ALTER
TABLE
COHORT
ADD
CONSTRAINT
xpk_COHORT
PRIMARY
KEY
(
cohort_definition_id
);
ALTER
TABLE
omop
.
CARE_SITE
ADD
CONSTRAINT
xpk_CARE_SITE
PRIMARY
KEY
(
care_site_id
);
ALTER
TABLE
omop
.
PROVIDER
ADD
CONSTRAINT
xpk_PROVIDER
PRIMARY
KEY
(
provider_id
);
ALTER
TABLE
omop
.
PAYER_PLAN_PERIOD
ADD
CONSTRAINT
xpk_PAYER_PLAN_PERIOD
PRIMARY
KEY
(
payer_plan_period_id
);
ALTER
TABLE
omop
.
COST
ADD
CONSTRAINT
xpk_COST
PRIMARY
KEY
(
cost_id
);
ALTER
TABLE
omop
.
DRUG_ERA
ADD
CONSTRAINT
xpk_DRUG_ERA
PRIMARY
KEY
(
drug_era_id
);
ALTER
TABLE
omop
.
DOSE_ERA
ADD
CONSTRAINT
xpk_DOSE_ERA
PRIMARY
KEY
(
dose_era_id
);
ALTER
TABLE
omop
.
CONDITION_ERA
ADD
CONSTRAINT
xpk_CONDITION_ERA
PRIMARY
KEY
(
condition_era_id
);
ALTER
TABLE
omop
.
EPISODE
ADD
CONSTRAINT
xpk_EPISODE
PRIMARY
KEY
(
episode_id
);
ALTER
TABLE
omop
.
METADATA
ADD
CONSTRAINT
xpk_METADATA
PRIMARY
KEY
(
metadata_id
);
ALTER
TABLE
omop
.
CONCEPT
ADD
CONSTRAINT
xpk_CONCEPT
PRIMARY
KEY
(
concept_id
);
ALTER
TABLE
omop
.
VOCABULARY
ADD
CONSTRAINT
xpk_VOCABULARY
PRIMARY
KEY
(
vocabulary_id
);
ALTER
TABLE
omop
.
DOMAIN
ADD
CONSTRAINT
xpk_DOMAIN
PRIMARY
KEY
(
domain_id
);
ALTER
TABLE
omop
.
CONCEPT_CLASS
ADD
CONSTRAINT
xpk_CONCEPT_CLASS
PRIMARY
KEY
(
concept_class_id
);
ALTER
TABLE
omop
.
RELATIONSHIP
ADD
CONSTRAINT
xpk_RELATIONSHIP
PRIMARY
KEY
(
relationship_id
);
ALTER
TABLE
omop
.
COHORT_DEFINITION
ADD
CONSTRAINT
xpk_COHORT_DEFINITION
PRIMARY
KEY
(
cohort_definition_id
);
instancia_omop_mysql/omop_tables.sql
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instancia_omop_postgresql/Makefile
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8fc87ae7
...
@@ -5,3 +5,5 @@ db:
...
@@ -5,3 +5,5 @@ db:
-e
POSTGRES_PASSWORD
=
postgres
\
-e
POSTGRES_PASSWORD
=
postgres
\
postgres:latest
postgres:latest
stop
:
docker
kill
postgres
instancia_omop_postgresql/README.md
0 → 100644
View file @
8fc87ae7
`psql "host=127.0.0.1 port=5432 dbname=omop password=postgres" -c "CREATE SCHEMA omop" -U postgres`
`psql "host=127.0.0.1 port=5432 dbname=omop password=postgres" -c "\i omop_ddl_postgres.sql" -U postgres`
`psql "host=127.0.0.1 port=5432 dbname=omop password=postgres" -c "\i omop_pk_postgres.sql" -U postgres`
`psql "host=127.0.0.1 port=5432 dbname=omop password=postgres" -c "\i omop_constraints_postgres.sql" -U postgres`
`psql "host=127.0.0.1 port=5432 dbname=omop password=postgres" -c "\i omop_indexes_postgres.sql" -U postgres`
`psql "host=127.0.0.1 port=5432 dbname=omop password=postgres" -c "DROP SCHEMA omop CASCADE" -U postgres`
instancia_omop_postgresql/omop_constraints_postgres.sql
View file @
8fc87ae7
...
@@ -350,7 +350,7 @@ ALTER TABLE omop.DRUG_STRENGTH ADD CONSTRAINT fpk_DRUG_STRENGTH_numerator_unit_c
...
@@ -350,7 +350,7 @@ ALTER TABLE omop.DRUG_STRENGTH ADD CONSTRAINT fpk_DRUG_STRENGTH_numerator_unit_c
ALTER
TABLE
omop
.
DRUG_STRENGTH
ADD
CONSTRAINT
fpk_DRUG_STRENGTH_denominator_unit_concept_id
FOREIGN
KEY
(
denominator_unit_concept_id
)
REFERENCES
omop
.
CONCEPT
(
CONCEPT_ID
);
ALTER
TABLE
omop
.
DRUG_STRENGTH
ADD
CONSTRAINT
fpk_DRUG_STRENGTH_denominator_unit_concept_id
FOREIGN
KEY
(
denominator_unit_concept_id
)
REFERENCES
omop
.
CONCEPT
(
CONCEPT_ID
);
ALTER
TABLE
omop
.
COHORT
_DEFINITION
ADD
CONSTRAINT
fpk_COHORT_DEFINITION_cohort_definition_id
FOREIGN
KEY
(
cohort_definition_id
)
REFERENCES
omop
.
COHORT
(
COHORT_DEFINITION_ID
);
ALTER
TABLE
omop
.
COHORT
ADD
CONSTRAINT
fpk_COHORT_cohort_definition_id
FOREIGN
KEY
(
cohort_definition_id
)
REFERENCES
omop
.
COHORT_DEFINITION
(
COHORT_DEFINITION_ID
);
ALTER
TABLE
omop
.
COHORT_DEFINITION
ADD
CONSTRAINT
fpk_COHORT_DEFINITION_definition_type_concept_id
FOREIGN
KEY
(
definition_type_concept_id
)
REFERENCES
omop
.
CONCEPT
(
CONCEPT_ID
);
ALTER
TABLE
omop
.
COHORT_DEFINITION
ADD
CONSTRAINT
fpk_COHORT_DEFINITION_definition_type_concept_id
FOREIGN
KEY
(
definition_type_concept_id
)
REFERENCES
omop
.
CONCEPT
(
CONCEPT_ID
);
...
...
instancia_omop_postgresql/omop_pk_postgres.sql
View file @
8fc87ae7
...
@@ -56,3 +56,4 @@ ALTER TABLE omop.CONCEPT_CLASS ADD CONSTRAINT xpk_CONCEPT_CLASS PRIMARY KEY (con
...
@@ -56,3 +56,4 @@ ALTER TABLE omop.CONCEPT_CLASS ADD CONSTRAINT xpk_CONCEPT_CLASS PRIMARY KEY (con
ALTER
TABLE
omop
.
RELATIONSHIP
ADD
CONSTRAINT
xpk_RELATIONSHIP
PRIMARY
KEY
(
relationship_id
);
ALTER
TABLE
omop
.
RELATIONSHIP
ADD
CONSTRAINT
xpk_RELATIONSHIP
PRIMARY
KEY
(
relationship_id
);
ALTER
TABLE
omop
.
COHORT_DEFINITION
ADD
CONSTRAINT
xpk_COHORT_DEFINITION
PRIMARY
KEY
(
cohort_definition_id
);
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